Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1933 ATGTCGCGTGATGAGATGGTAAACGCCGCGGGCTTCGTCGGCGAAGGTAGTAGTAGCTCCGCTTCTGCTCGCGTCGCCGACGATTCTCAACGCAAGCGCACCAGAATCTTCAGTGATTTCGATGGTGAGAATGGCGGAGAAGAAGATGACCGTGGCATCACAAGAGTAGAAGATCGAGAGGTCAGGTTGGATCTCACGGATGACTTATTGCACATGGTTTTCTCATTTTTGGATCCTATCAATCTCTGCAAAGCTGCCAGGGTTTGTAAGCAGTGGCGAACTGCTAGTGCTCATGAAGATTTCTGGAGGACTTTGAATTTTGAAGATCTGGACATATCTTTGGGTGAATTTGAGGATATGTGTAGGCGTTATCCTAAAGCCACAGAAGTGAGCTTATCTGGTCATGATATGCACCTGCTTGTCATGAACGCTATCTCTTTACTAAGAAACCTTGAGGTTTTAACATTGGGAAGAGGACATGTAGCGGATAGTTTTTTCCATGCTTTGGATGATTGTTCTATGTTGAAAAGACTAAGCATCAATGATGCTACACTTGGCAGTGGTGTTCAGGAGATATCTATTAGTCATAATAGGCTGTGTCATCTTCAACTAACAAAATGCCGTGTGATACGAGTAGGAGTCAGGTGCCCACAGCTTGAAACTATGTCATTGAAGCGCAGTAACGTTGCACACGCTGTGCTTAATTGCCCTCTTCTGCACGAGCTTGACATAGGCTCTTGCCACAAACTTGGTGATTCTGCAATTCGCTCAGCTGCAACTGCATGCCCACAATTAGTTTCTCTGGACATGTCTAATTGTTCAAGTGTTACCGATGAAACACTACGAGAGATATCCTTGACTTGCACTAACCTTAGTTTCCTGGATGCATCATACTGCCCTAATGTATCTCTTGAGTCTGTTAGACTGCCAATGTTGACAGTTCTGAAGCTTCACAGTTGTGACGGCATCACTTCAGCTTCAATGGCTGCAATAGATCATAGTCATTCGTTGGAGGTTTTGGAGCTTGATAATTGTAGCCTGTTGACTTCAGTGTCGTTGGAGCTACCACTTCTGCAGAATATTAGATTGGTACACTGTCGCAAATTAGCTGATTTGAACTTGAGGACTATATTGCTTTCTTCTATGGTGATGTCCAACTGCCCTGCACTCCATGATATCAACATAACTTCAAATTCACTTCAAAAATTAGCAATACCAAAGCAGGACAGCTTAACCGCATTAGCTCTGCAATGCCAATCTTTACAAGAAGTGGATCTATCTGAGTGCGAGTGTTTGACAAACTCTGTATGCGATGTTTTTAGTGAAGGTGGAGGATGCCCAATGTTGAAACTATTAGTTCTTGAGAACTGTGAGAGTCTGACGTCAATTAGATTCATCAGTACCTCTTTAGTCAATCTTTCACTTGGTGGTTGTCGGGCAATAATTAATCTCGAGCTCACATGCCCTAAGCTTGAGAAAGTCATTTTGGATGGTTGTGATCATTTGGAAAGAGCATCATTTTGTCCTGTTGGTCTTCGATCACTTAATCTAGGAATATGTCCAAAACTGAACACGCTCAGCATCGAAGCACCATTCATGGTTTCGCTTGAGTTGAAAGGATGTGGTGTACTGTCTGAAGCAATCATTAATTGTCCGCTCTTAACTTCTCTGGATGCTTCCTTTTGCAGCCAGCTAACGGATGGCTGCTTGTCTGCAACGACTGCCTCATGCCCACTCATTGAGACATTAATATTGATGTCATGCCCATCAATTGGTTCAGATGGACTTCGTTGTCTGAGTTGGCTTCCAAACTTGACCGTTCTTGACTTATCATACACTTTCTTGGTGAACTTGCAGCCTGTTTTTGAGTCATGTCCACAGCTAAAGGTGTTAAAATTGCAGGCATGTAAATATCTCTCTGACACTTGTCTTGGACCTCTTTACAAGGAAGGTGCTTTACCAGCACTTCAGGAGTTGGACTTGTCTTATGGAACTCTCTGTCAGTCTGCCATAGATGAACTTCTTGCTTGCTGCACAAATCTCAGACGTGTGAGCTTGAATGGCTGTGTGAATGTGCATGATTTAAATTGGGGATACAGTCATGGGCAGATTGTCGTGTTGCCTGCTGTAAAGACCCCATATGGTTCAAGTTCCTGTGAAAATACTGCCCAATCAAGTGAGCAATCAGGCCGGTTACTTCAGAAGCTCCACTGTGTGGGTTGTTCAAATATTAGAAAGGTTACAATTCCATTAAGGGCACATTGTTTCCATTTATTATCTTTAAACCTTTCACTGTCGACAAATTTGAAGGAGGTTGATATTACTTGTGTCAACCTATACTTCCTTAATTTAAGCAATTGTTCCGCTTTAGAAATTTTAAAGCTAGACTGTCCGAGATTGAGCAGCCTATTCCTTCAGTCTTGCAATATTGATGAGGAAGCTGTTGAAGCTGCCATATCAAAATGCACTATGCTGGAGACTCTTGATGTTCGCTTCTGTCCAAAGATAAGCGCAATGAGCATTTGGAGATTCCGTGCGGCATGTTCTAGTTTGAAGCGTATATATAGCAAGTTGTCAACTTCATGA 2586 0.4285 MSRDEMVNAAGFVGEGSSSSASARVADDSQRKRTRIFSDFDGENGGEEDDRGITRVEDREVRLDLTDDLLHMVFSFLDPINLCKAARVCKQWRTASAHEDFWRTLNFEDLDISLGEFEDMCRRYPKATEVSLSGHDMHLLVMNAISLLRNLEVLTLGRGHVADSFFHALDDCSMLKRLSINDATLGSGVQEISISHNRLCHLQLTKCRVIRVGVRCPQLETMSLKRSNVAHAVLNCPLLHELDIGSCHKLGDSAIRSAATACPQLVSLDMSNCSSVTDETLREISLTCTNLSFLDASYCPNVSLESVRLPMLTVLKLHSCDGITSASMAAIDHSHSLEVLELDNCSLLTSVSLELPLLQNIRLVHCRKLADLNLRTILLSSMVMSNCPALHDINITSNSLQKLAIPKQDSLTALALQCQSLQEVDLSECECLTNSVCDVFSEGGGCPMLKLLVLENCESLTSIRFISTSLVNLSLGGCRAIINLELTCPKLEKVILDGCDHLERASFCPVGLRSLNLGICPKLNTLSIEAPFMVSLELKGCGVLSEAIINCPLLTSLDASFCSQLTDGCLSATTASCPLIETLILMSCPSIGSDGLRCLSWLPNLTVLDLSYTFLVNLQPVFESCPQLKVLKLQACKYLSDTCLGPLYKEGALPALQELDLSYGTLCQSAIDELLACCTNLRRVSLNGCVNVHDLNWGYSHGQIVVLPAVKTPYGSSSCENTAQSSEQSGRLLQKLHCVGCSNIRKVTIPLRAHCFHLLSLNLSLSTNLKEVDITCVNLYFLNLSNCSALEILKLDCPRLSSLFLQSCNIDEEAVEAAISKCTMLETLDVRFCPKISAMSIWRFRAACSSLKRIYSKLSTS* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1933 861 PANTHER OS10G0396666 PROTEIN 27 822 IPR044703 GO:0010252|GO:1905393
Dod09g1933 861 PANTHER OS10G0396666 PROTEIN 27 822 - -
Dod09g1933 861 MobiDBLite consensus disorder prediction 1 52 - -
Dod09g1933 861 Gene3D Ribonuclease Inhibitor 711 859 IPR032675 -
Dod09g1933 861 Gene3D Ribonuclease Inhibitor 306 525 IPR032675 -
Dod09g1933 861 SMART fbox_2 65 105 IPR001810 GO:0005515
Dod09g1933 861 Gene3D Ribonuclease Inhibitor 61 305 IPR032675 -
Dod09g1933 861 MobiDBLite consensus disorder prediction 26 52 - -
Dod09g1933 861 ProSiteProfiles F-box domain profile. 59 105 IPR001810 GO:0005515
Dod09g1933 861 Pfam F-box-like 67 107 IPR001810 GO:0005515
Dod09g1933 861 Gene3D Ribonuclease Inhibitor 526 618 IPR032675 -
Dod09g1933 861 Gene3D Ribonuclease Inhibitor 619 698 IPR032675 -
Dod09g1933 861 SUPERFAMILY F-box domain 56 113 IPR036047 GO:0005515
Dod09g1933 861 SMART LRR_CC_2 355 380 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 488 513 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 262 287 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 309 334 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 822 847 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 797 821 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 678 725 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 551 576 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 236 261 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 446 476 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 577 602 IPR006553 -
Dod09g1933 861 SMART LRR_CC_2 418 442 IPR006553 -
Dod09g1933 861 SUPERFAMILY RNI-like 619 854 - -
Dod09g1933 861 SUPERFAMILY RNI-like 418 645 - -
Dod09g1933 861 SUPERFAMILY RNI-like 98 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1933 Dod-Chr9 40859855 40865044 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1933 - - gmx:100786178 1308.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1933 09 40859855 40865044 Dod09g1933 09 40859855 40865044 ECH