Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1922 ATGATGCATGTTAAGGGTGATTTCAATTATAAGGAGGCTCTCACCAAGTCCTTAATTTTCCTAGAGGCACAACGATCAGGGAAGCTCCCTTCCAATAACAGGTTGCCTTGGAGAGGAGACTCAGCACTAGATGATGGAAAACTAGCTAATGTGGACCTTGTTGGGGGTTACTATGATGCAGGGGATAATGTGAAGTATGGGCTCCCCATGGCTTTCACTATTACTACTCTATCATGGGCGGCCATTTTTTACAAGTCAGAGTTAGAAGCTGCAAAGGAAATGGGGCATGTTCAAGATGCAATCCAATGGGGAACTGATTATTTTCTGAAAGCTAGTTCTAGACGCAAAAGATTATATGTACAGGTAGGGGACCCTGAAAAGGACCACCACTGTTGGATACGACCAGAAAATATGAAAACCAAAAGAACGGTTTTAAAGATTGACAGTGACATGCCCGGAACTGAGATTGCAGCTGAAACTGCTGCGGCAATGGCTGCTTCTTCCATAGTTTTTAGGCACTCAGATCGTAAATATTCTCGCCGTCTCCTTAATAAAGCAAAACTACTTTTCCATATGGCAAGATCGCATAAAGGAACCTATGATGGAGAGTGCCCCTTCTACTGCTCTTACTCGGGATATAATGATGAACTGCTGTGGGCAGCCACGTGGCTATACCTTGCTACTAGGAAGCCTATGTATTTGACGTACATACAAGAGGAATCCATTAGTGCTAATGTTGCAGAATTTAGTTGGGACCTCAAATATGCAGGAGCTCAAATCCTTCTTACCAAGTTACATTTTGGAGGAATCAAGAATCTGGAGACATTCAAAACTCAAGCCGAAAGTTTCATATGTTCAGTCCTTCCTGATAGTCCCTACCACCAAATTAACTTGACCCCTGGAGGGTTCATTCATTTGAGAGATGGGGCCAACACACAGTATGCCACTGGCACAGCATTCTTGTTCACTGTATATGGTGATTTGCTTGCCAAACATAAACAGAAAGTCACTTGCGGAAACAAACAATTTGGCTCATCCCAACTCCTCTCTTTTGCTAAGAAACAAATGGATTACATACTAGGGAAAAACCCTGAAGGAAGATCGTACATGGTGGGGTTTGGGAAGAACCCACCAACGCAAGCTCACCATAGAGGTGCTTCGGTGCCAAAGTTGTCCAAGGACGATGTGGTCGACTGTGCCTTGACCTTCTCAAAATGGTTTCAAAAGGACCAATCCAACCCCAATGAGCTCACTGGTGCCATTGTTGGTGGACCTGACCAAAACGACAAGTTCAATGATAAACGCTGGGATTCACCCAACACTGAGCCATGCACATACATTAATTCCCTAGCAGTTGGAGCTCTAGCAAAGCTCGCATCTTTGAGTTGA 1389 0.4413 MMHVKGDFNYKEALTKSLIFLEAQRSGKLPSNNRLPWRGDSALDDGKLANVDLVGGYYDAGDNVKYGLPMAFTITTLSWAAIFYKSELEAAKEMGHVQDAIQWGTDYFLKASSRRKRLYVQVGDPEKDHHCWIRPENMKTKRTVLKIDSDMPGTEIAAETAAAMAASSIVFRHSDRKYSRRLLNKAKLLFHMARSHKGTYDGECPFYCSYSGYNDELLWAATWLYLATRKPMYLTYIQEESISANVAEFSWDLKYAGAQILLTKLHFGGIKNLETFKTQAESFICSVLPDSPYHQINLTPGGFIHLRDGANTQYATGTAFLFTVYGDLLAKHKQKVTCGNKQFGSSQLLSFAKKQMDYILGKNPEGRSYMVGFGKNPPTQAHHRGASVPKLSKDDVVDCALTFSKWFQKDQSNPNELTGAIVGGPDQNDKFNDKRWDSPNTEPCTYINSLAVGALAKLASLS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1922 462 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 358 384 IPR018221 -
Dod09g1922 462 Pfam Glycosyl hydrolase family 9 10 455 IPR001701 GO:0004553|GO:0005975
Dod09g1922 462 PANTHER ENDOGLUCANASE 16-RELATED 5 459 - -
Dod09g1922 462 PANTHER ENDO-1,4-BETA-GLUCANASE 5 459 - -
Dod09g1922 462 SUPERFAMILY Six-hairpin glycosidases 6 460 IPR008928 GO:0005975
Dod09g1922 462 Gene3D - 4 462 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1922 Dod-Chr9 40788331 40791022 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1922 1 460 Glycoside Hydrolase AT3G43860 71.800 0.0 688
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1922 K01179 - gmx:100811509 796.193
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1922 09 40788331 40791022 Dod09g1922 09 40788331 40791022 ECH