Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1921 ATGTCTTTGTATTCTCCTGACATTGTCCTAGTTCTCTTGTTAGAAACTATGGGCTTACTCTGCAGCAGAAACCGTCGTTATAATGATGCTGAGGCTGAAGAAAATGCCCAGGCTGCGGAAATTGAGAGAAGAATAGAGTTAGAAACAAAGGCAGAAAAACACATTCAGAAACTTCTCCTACTAGGTGCTGGAGAGTCAGGGAAGTCTACAATCTTTAAGCAGATAAAACTTTTGTTTCAAACGGGCTTTGATGAGGCTGAGCTAAAAAGCTACATACCAGTCATTCATGCTAATGTGTATCAGACAATAAAATTGCTGCATGATGGGTCAAAGGAGTTGGCTCAGAATGATCTTGATTCTTCAAAGTATGTGATATCTAGTGAAAAGAAGGATATTGGTGAAAGGCTCTCAGACATTGGGGGCAGGCTGGATTACCCACATCTAACCAAGGAGCTTGCACAGGAAATAGAGACTCTGTGGAAGGATGCTGCAATTCAGGAAACTTATGCACGTGGGAATGAGCTCCAAGTTCCAGATTGTGCTCATTATTTCATGGAAAACTTGCAGAGGCTGTCTGATGCGAACTATGTTCCAACCAAGGAAGATGTTTTGTATGCAAGAGTTCGTACAACTGGTGTTGTGGAGATCCAATTCAGCCCCGTTGGAGAAAACAAGAGAAGTGGCGAAGTCTATAGACTCTTTGATGTTGGTGGCCAGCGAAATGAAAGGAGAAAATGGATCCATCTTTTTGAAGGAGTCTCGGCTGTAATATTCTGTGCTGCTATTAGCGAGTATGATCAAACGCTTTTTGAGGATGAAAACAAGAATAGAATGACGGAGACCAAGGAACTTTTTGAGTGGGTCCTGAAGCAGCCATGTTTTGAGAAAACATCCTTCATGTTATTTTTAAACAAGTTTGACATATTCGAGAAGAAGATCCTAAAAGTACCACTGAATGTGTGTGAGTGGTTCAAAGATTACCAGCCAGTTTCGACAGGGAAACAAGAGATTGAACATGCATACGAGTTTGTGAAGAAAAAGTTTGAAGAGTTGTATTTCCAGAGCACTGCTCCTGACCATGTCGATCGCGTGTTTAAGGTCTATAGGACCAGTGCCCTTGATCAAAAGCTCGTGAAGAAGACTTTCAAGCTTGTTGATGAGACCTTGAGGCGGAGGAATCTCTTTGAAGCCGGCTTATTGTGA 1203 0.4198 MSLYSPDIVLVLLLETMGLLCSRNRRYNDAEAEENAQAAEIERRIELETKAEKHIQKLLLLGAGESGKSTIFKQIKLLFQTGFDEAELKSYIPVIHANVYQTIKLLHDGSKELAQNDLDSSKYVISSEKKDIGERLSDIGGRLDYPHLTKELAQEIETLWKDAAIQETYARGNELQVPDCAHYFMENLQRLSDANYVPTKEDVLYARVRTTGVVEIQFSPVGENKRSGEVYRLFDVGGQRNERRKWIHLFEGVSAVIFCAAISEYDQTLFEDENKNRMTETKELFEWVLKQPCFEKTSFMLFLNKFDIFEKKILKVPLNVCEWFKDYQPVSTGKQEIEHAYEFVKKKFEELYFQSTAPDHVDRVFKVYRTSALDQKLVKKTFKLVDETLRRRNLFEAGLL* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1921 400 CDD G-alpha 56 394 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod09g1921 400 Gene3D - 57 388 IPR027417 -
Dod09g1921 400 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 17 400 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod09g1921 400 SUPERFAMILY Transducin (alpha subunit), insertion domain 83 208 IPR011025 GO:0007165
Dod09g1921 400 Coils Coil 24 44 - -
Dod09g1921 400 PANTHER GUANINE NUCLEOTIDE-BINDING PROTEIN ALPHA-1 SUBUNIT 17 400 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dod09g1921 400 SMART galpha_1 35 399 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod09g1921 400 Pfam G-protein alpha subunit 38 388 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod09g1921 400 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 397 IPR027417 -
Dod09g1921 400 ProSiteProfiles G-alpha domain profile. 54 400 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod09g1921 400 Gene3D - 84 209 IPR011025 GO:0007165
Dod09g1921 400 PRINTS Alpha G protein (transducin) signature 299 308 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod09g1921 400 PRINTS Alpha G protein (transducin) signature 57 72 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod09g1921 400 PRINTS Alpha G protein (transducin) signature 231 248 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod09g1921 400 PRINTS Alpha G protein (transducin) signature 253 281 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod09g1921 400 PRINTS Alpha G protein (transducin) signature 196 218 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Dod09g1921 400 PRINTS Plant G protein alpha subunit signature 108 122 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dod09g1921 400 PRINTS Plant G protein alpha subunit signature 43 52 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dod09g1921 400 PRINTS Plant G protein alpha subunit signature 352 364 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dod09g1921 400 PRINTS Plant G protein alpha subunit signature 93 106 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dod09g1921 400 PRINTS Plant G protein alpha subunit signature 286 297 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dod09g1921 400 PRINTS Plant G protein alpha subunit signature 335 350 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dod09g1921 400 PRINTS Plant G protein alpha subunit signature 132 146 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
Dod09g1921 400 PRINTS Plant G protein alpha subunit signature 216 231 IPR002976 GO:0001664|GO:0003924|GO:0005834|GO:0007188|GO:0031683
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1921 Dod-Chr9 40781153 40786373 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1921 K19729 - gmx:100781223 713.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1921 09 40781153 40786373 Dod09g1921 09 40781153 40786373 ECH