Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1915 ATGAACTTTTCCAAGAAAGGATCCGAAACGGAAGCGAAACTAAGCAGCCCAAACAAGGCAACTACTTTGAATCCAAATGCAGCAGAGTTTATTCCTTCTGCCCTCAGATCATCATTATCTGGAACTGCCAGCTCGGTTGATGCGACAACAAGGCTTGCCACTGCTACTGCTCTTGGGAAAGCAGTTTTAGATCGATCAGAATCATCCATTTCAAATCATTCTGATGATGAGGTGCACCAATACTGGCGATGCCAGCTCCCTGATGATATAACCCCTGATTTCAAGGTCACGGGAGAAGATGAGTCCCAAGGTGTCAATGACCTTCCTTTAGCAGGATTATCCATACATGATGAAATTGAAGGCTCAAGGTTTCCTTCCTTTAAAGGAAGTAGGTATATGTTAAATGAACATGAGGAATTATCTCAACGGCACATTAATGGCAATAGCTTTGCTGATAGATTAAGGTTTTCTAATTCTAGCTTTGGGGAGGACCTGACTTCAGCAAGGTTTTCAAACACTTTAACAACTCCTTGGGATAGACCAATTGGGAGTACCATCCAGCATGTTAGCAGTGGTCAAGAGGGGCTCACGTATGATGACAACTCTGGACATGGATTCATAAATGATACTTTGGCTGAGAATGCAATTGTTGATGATACTGAATTGAATCCTTTGGAGTTTTTAGCTTCTCTGTTCCCTGGTTTTGCATCGGAAAGCCTTGTGGATGTTTACTTTGCTAATGGATGCGATTTGCATTTGACCACTGAGATGCTCACTCAGTTAGAGCTTCAAGTTGATGTTAGTTTCAATCAGAATCTGAGTTCAAAGACGCCGTCAGCTCCCAATCTCAGTTCAATGGACTTTCCTGCACTTACTTCACCAGATGGTCAGAGCCAGGCTGCTTCTGTAAAATTTTCTGCAGATAATGTCCAACAAAGTGGCAACTCGTACCGATCGTCTGATAAAGACATGCTGTTTTTCAAATCTAGCTCTTCGGTTCCATCTAGAGGCGCTGTTGACTTTGCTTCAGCTGTTAGGAAGTTGGCTTCTCAGGACACTGGTATTTGGAAGTATGATAAAAATGGTTCTGGTGATGCCGCTATTGGCTCAAGTAGGACTTCTCATGCCCTGGTTAGTGGCTGCGATGATGGACAGGGGAGAGCCAACTTCAGCGATCGGACACACAGCCGTGGTTCAGCTCGGGCAGCTCCTGTTTGGCTTGAAACCGGTGACGCAGTTGCAAACATGTACTCGGACCTGCGGGAGGAGGCTCGTGATCATGCACGTTTACGTAATGCATATTTTGAGCAGGCACGGCAAGCTTATTTAATTGGCAATAAGGCCCTAGCAAAGGAACTAAGTGTTAAAGGGCAAGTGCACAACATGCATATGAAAGCAGCTCATGGAAAAGCTCAAGAATCTATTTACCGCCAGAGAAATCCAGTTGCTCCAGAGATGCAGGGCAATGGAAGAGGACCGGAGAGGATGATAGACCTGCATGGGTTGCACGTGAGTGAGGCCATCCATGTGCTGAAATATGAATTGAGCGTGCTGAAAAGCACTGCCAGAGCTGCCGACCAGCGATTGCAGGTTTATATTTGTGTGGGCACAGGTCATCATACCCGGGGTTCCCGCACTCCGGCGAGACTTCCAATAGCTGTACAGCGATTCCTACTTGAAGAAGGTCTTGACTTCACAGAACCTCAGCCAGGGCTACTTCGTGTTGTGATATATTGA 1737 0.4571 MNFSKKGSETEAKLSSPNKATTLNPNAAEFIPSALRSSLSGTASSVDATTRLATATALGKAVLDRSESSISNHSDDEVHQYWRCQLPDDITPDFKVTGEDESQGVNDLPLAGLSIHDEIEGSRFPSFKGSRYMLNEHEELSQRHINGNSFADRLRFSNSSFGEDLTSARFSNTLTTPWDRPIGSTIQHVSSGQEGLTYDDNSGHGFINDTLAENAIVDDTELNPLEFLASLFPGFASESLVDVYFANGCDLHLTTEMLTQLELQVDVSFNQNLSSKTPSAPNLSSMDFPALTSPDGQSQAASVKFSADNVQQSGNSYRSSDKDMLFFKSSSSVPSRGAVDFASAVRKLASQDTGIWKYDKNGSGDAAIGSSRTSHALVSGCDDGQGRANFSDRTHSRGSARAAPVWLETGDAVANMYSDLREEARDHARLRNAYFEQARQAYLIGNKALAKELSVKGQVHNMHMKAAHGKAQESIYRQRNPVAPEMQGNGRGPERMIDLHGLHVSEAIHVLKYELSVLKSTARAADQRLQVYICVGTGHHTRGSRTPARLPIAVQRFLLEEGLDFTEPQPGLLRVVIY* 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1915 578 SUPERFAMILY SMR domain-like 495 576 IPR036063 -
Dod09g1915 578 MobiDBLite consensus disorder prediction 1 25 - -
Dod09g1915 578 Pfam Ataxin-2 C-terminal region 21 34 IPR009818 -
Dod09g1915 578 ProSiteProfiles Smr domain profile. 497 578 IPR002625 -
Dod09g1915 578 CDD CUE_CID7_like 222 264 IPR041806 -
Dod09g1915 578 PANTHER POLYADENYLATE-BINDING PROTEIN-INTERACTING PROTEIN 7 1 578 - -
Dod09g1915 578 SMART SMR_2 494 578 IPR002625 -
Dod09g1915 578 Pfam Domain of unknown function (DUF1771) 417 480 IPR013899 -
Dod09g1915 578 Gene3D - 464 577 IPR036063 -
Dod09g1915 578 SMART DUF1771_2 416 481 IPR013899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1915 Dod-Chr9 40724754 40729772 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1915 - - vun:114164614 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1915 09 40724754 40729772 Dod09g1915 09 40724754 40729772 ECH