Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1909 ATGGCCGTTGAGGACAGATGCTGCGTCGTCACCGGGGGGCGCGGCTTCGCCGCCCGCCACCTGGTGGAAATGCTGATTCGAGAGAACACCTACTCCGTCGTTCGAATCGCCGATTTGGGACCCGCCATTGAGCTCGAACCCTCCGAACAATTGGGGATTCTTGGTCAAGCCTTGAGCTCTTGTCGCGCCCAATACGTCTCTGTCGACCTTCGCAACAAGTCCCAAGTCCTCAAAGCATTGGAAGGAGCTGAGGTTGTGTTCCACATGGCGGCTCCGAACTCTTCCATTAACAACTACCAGCTTCACCATTCCGTTAATGTCCAAGGAACAAAGAATGTGATTGATGCTTGTGTTGAGCTTAAAGTGAAGCGGCTCGTATACACCAGCTCTCCTAGTGTCGTCTTTGATGGGGTTCATTCAATTCATAATGGAAATGAGTCAATGCCCTATCCACCTTCGCATAATGATCATTATTCCACAACTAAAGCTGAGGGTGAGGCATTGGTTATTAAGGCTAATGGAACTAATGGGCTCCTAACATGCTGCATACGGCCTAGTAGCATTTTTGGGCCTGGTGATAGACTGCTAGTGCCTTCATTAGTTGATGCTGCCAGGGCAGGGAAATCCAAGTTCATTATTGGCGATGGCAATAATGTATTTGATTTCACTTATGTTGAAAATGTGGCTCATGCCCATATATGTGCTGACCGAGCTCTAGTTGCAGAAGGGGAAGTTTCAGAAAAAGCTGCAGGACAGGCTTATTTCATAACCAATATGGAACCTATAAAGTTTTGGGAGTTTGTATCACTTATTTTGGAAGGTCTTGGATATGAAAGGCCAAGAATAAGGATCCCTGCCTCTGTTATCATGCCAATCGCACATTTGGTGGAGTGGATTTATAGGCTGTTAGGCCCATATGGGATGAAGGTGCCTCAGTTGACACCTTCAAGAGTAAGACTTTTGTCTTGCACCAGATCTTTTGATTGCTCAAAAGCAAAGGATCGCCTTGGCTATGTACCCGTTACCACACTTCAGGAGGGACTACGGAGGACAATTGAATCATACCCACACTTGAGGGCTGAAAATCAACGGAAGGCTAAAAGAGAAGGGCCCTCAAAGGCTTTCATATATCTTGGAAGTGGAAGAGTTGCTGACACATTGCTTTGGAAGGATAAAAAGCAAACTTCCGTCACATTGTTAGTCTTGGTTGCAATATACTTCAACTTCATTGCAACTGGGAATACCATCATCACTGCTCTTTCAAAGCTTCTTTTGTTCACATCAATCTTTTTATTCGTTCATGGCATTCTACCTGCAAAAATATTGGGGTATACCGTTGAAAAAATGCCCAAATCATGGTTTCACTTATCAGAAGATATGTCACATCAAATTGCTCTTTCAGTGGCATCGTCATGGAATTTTGCTGTGCATATCTTGAAATCCCTTGCGCAAGGGAATAACTGGATGCTATTCTCCAAGGTTGTTTTCTCTCTACTCGTTCTTAGCTTCCTTGGAGCCTTTTCACTTCAGAACTTATATACCATAGGACTTACTTCTGCGTTTATAGCTTTCTACATCTATGAAACGAAGGAGGAAGACATTGATGAGTTATTCATAAAGACACATTCTTTTGGATGCAGATTGAAATCTGATCTCACCAGGAAGCTCCTCTCTTCTAAGAAGATTGTTTGA 1692 0.4415 MAVEDRCCVVTGGRGFAARHLVEMLIRENTYSVVRIADLGPAIELEPSEQLGILGQALSSCRAQYVSVDLRNKSQVLKALEGAEVVFHMAAPNSSINNYQLHHSVNVQGTKNVIDACVELKVKRLVYTSSPSVVFDGVHSIHNGNESMPYPPSHNDHYSTTKAEGEALVIKANGTNGLLTCCIRPSSIFGPGDRLLVPSLVDAARAGKSKFIIGDGNNVFDFTYVENVAHAHICADRALVAEGEVSEKAAGQAYFITNMEPIKFWEFVSLILEGLGYERPRIRIPASVIMPIAHLVEWIYRLLGPYGMKVPQLTPSRVRLLSCTRSFDCSKAKDRLGYVPVTTLQEGLRRTIESYPHLRAENQRKAKREGPSKAFIYLGSGRVADTLLWKDKKQTSVTLLVLVAIYFNFIATGNTIITALSKLLLFTSIFLFVHGILPAKILGYTVEKMPKSWFHLSEDMSHQIALSVASSWNFAVHILKSLAQGNNWMLFSKVVFSLLVLSFLGAFSLQNLYTIGLTSAFIAFYIYETKEEDIDELFIKTHSFGCRLKSDLTRKLLSSKKIV* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1909 563 Pfam Reticulon 383 538 IPR003388 -
Dod09g1909 563 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 9 283 IPR002225 GO:0003854|GO:0006694|GO:0016616
Dod09g1909 563 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 1 5 360 - -
Dod09g1909 563 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 355 IPR036291 -
Dod09g1909 563 Gene3D - 2 359 - -
Dod09g1909 563 ProSiteProfiles Reticulon domain profile. 383 563 IPR003388 -
Dod09g1909 563 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 5 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1909 Dod-Chr9 40664398 40674198 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1909 2 372 Lipid Metabolism Gene Families AT2G33630 32.391 2.91e-50 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1909 K23558 - gmx:100816854 941.414
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1909 09 40664398 40674198 Dod09g1909 09 40664398 40674198 ECH