Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1906 ATGCTGTTAACGCGCTCCATTCACAGACTGCGTTTCTTCAAAATCTCAATGCTCAAACCCTCGTTGAACCCTTGGATGAAGAAGCTCAATGCAGCTTCCATTCTCTTCCCCGTTCCACTTGGAAGCGTGTGGCGTCGATGGATGACGACGAGCAAGAGGGTCCAAGACAGGAGCAAGGCGAAGAGGATCCACGACCTCGAGGTCGCAACCGAGAAATGGAAGATCCTCTCCAAGATCCTCTTCCTCATCGAAACCCTCAAGCAACAGCCCGAAATGATCATCCCCGTTCGATCCCTTGAAAACTACCGCAAGCAGATCAACCTCCCCAAACCCAACCGCATCTCCGATTTCATTCGCAAGACGCCCAAGCTATTCGACCTCTACAAGGACCGCAAGGGGGTTTTGTGGTGCGGCATGACGGAGAAGGCGGAGGAGCTGGTTGAGGAAGAACGGAAGATTCTGGAACATCACGCGGAGAAGGCCGCGGAACACGTCACGAGGCTTCTCATGATGTCGGTGGACAAGCGTCTTCCTTTGGAGAAGATCGCTCATTTCCGAAGGGATTTCGGGTTGCCGATGGATTTTAGGGTTAATTGGGTGCACCAGTACCCGCAGCATTTCAGGGTTGTGAAGTCCGTCGATGAAGTTGAGTTCCTTGAGCTTGTTTCTTGGAACCCTAATTGGGCAATCACGGAGCTTGAGAAGAAGGCTACAGGGGTAACTGAATCTGAATCCGAATGCACCAATACCTTGAATTTGCATACCCCTGGTATGCTTTCACTTCCATTCCCTTTGAAATTCCCTGCAAATTATAAGAGTATATGTCGTTATAGTGAAAAGATTCAGGATTTTCAGGGAAGGGCTTATTTGTCTCCTTATGCTGATGCGAGTGGTCTTAAGGCTGGTTCTCTTGAATTTGATAAGAGGGCAATTGCTGTTATGCATGAGATTCTTAGTTTCACCATTGAGAAGAGGCTGGTCACTGATCACCTCACTCACTTCCGTTGGGAGATGGTGATGCCTCAGAAGCTCATGAGGCTTCTTCTTAAGCATTGTGGGATATTCTATGTCTCCGAGAGGGGGAAGAGGTTTAGTGTGTTCCTTACTGAAGCTTATGAAGGCTCGGAACTGGTTGAGAAATGCCCCTTGGTTCTTTGGAGGGAAAAGGTTCTGAACCTTGTCGGTTATAGAGCAAGGAAGAAGAAATTTGAGACGCTCAGTGACGTGTCGGATGAGGAAGAAGGTGATATTGATTTTCTCCAGAGTGACTCTGAAGTGGGGAACTTGGATGTGCGGCTTGAGCAACAGGGTACCATGGATTACGAGGAGCCTTTACTTGTGGACAGTTCTGAGATGGATGTTGAAGAGATTGCCTGTGAATATCAAAATCTTGAAACTTCTTGA 1404 0.4815 MLLTRSIHRLRFFKISMLKPSLNPWMKKLNAASILFPVPLGSVWRRWMTTSKRVQDRSKAKRIHDLEVATEKWKILSKILFLIETLKQQPEMIIPVRSLENYRKQINLPKPNRISDFIRKTPKLFDLYKDRKGVLWCGMTEKAEELVEEERKILEHHAEKAAEHVTRLLMMSVDKRLPLEKIAHFRRDFGLPMDFRVNWVHQYPQHFRVVKSVDEVEFLELVSWNPNWAITELEKKATGVTESESECTNTLNLHTPGMLSLPFPLKFPANYKSICRYSEKIQDFQGRAYLSPYADASGLKAGSLEFDKRAIAVMHEILSFTIEKRLVTDHLTHFRWEMVMPQKLMRLLLKHCGIFYVSERGKRFSVFLTEAYEGSELVEKCPLVLWREKVLNLVGYRARKKKFETLSDVSDEEEGDIDFLQSDSEVGNLDVRLEQQGTMDYEEPLLVDSSEMDVEEIACEYQNLETS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1906 467 PANTHER EXPRESSED PROTEIN 41 458 - -
Dod09g1906 467 Pfam Plant organelle RNA recognition domain 61 397 IPR021099 GO:0003723
Dod09g1906 467 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 41 458 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1906 Dod-Chr9 40606531 40609911 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1906 - - aprc:113865655 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1906 09 40606531 40609911 Dod09g1906 09 40606531 40609911 ECH