Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1905 ATGGCCAATGAACGTGATCTGTTCTCCACGGAGATCGTGAATCGGGGGATTGAATCCTCCGGTCCTAACGCGGGTTCACTGACGTTCTCGGTGAGGGTGAGGAGGCGGCTGCCAGATTTTCTTCAATCGGTGAACCTCAAGTACGTGAAGTTGGGGTACCATTACCTCATAAACCATGGCATTTACTTGCTCACCATCCCGGTGCTGCTTGTGGTGTTCAGTGCCGAGGTTGGTAGCCTCAGCAAGGAGGATCTGTGGAAGAAGCTATGGGAAGATGCGCGTTATGACCTTGCCACCGTGCTTGCTTCCTTTGGCGTCTTTGTCTTCACCTTGTCTGTCTACTTCATGTCAAGGCCTCGCCCCATTTACCTCGTTGATTTTGCATGCTATCGACCCGAAGATGACCTCAAGGTGTCAAGGGATCAGTTCGTTGAGCTAGCAAGGAAATCAGGCAAGTTCGACGAAGGGAGCCTGGAGTTCCAAAAGAGGATCCTAATGTCCTCGGGTATAGGCGACGAGACCTACATCCCAAAGGCAGTGATAGCCTCCAACGAGAACACCGCAACAATGAAAGAAGGGCGTGCTGAAGCATCCACGGTGATGTTCGGAGCACTCGACGAGCTCTTCGAGAAAACCAGGGTTCGACCAAAGGACGTTGGGATCCTAGTAGTGAACTGCAGCATCTTCAACCCAACACCATCACTGTCAGCGATGATCATAAACCATTACAAGATGAGGGGGAACATACTGAGCTACAACCTGGGAGGGATGGGTTGCAGTGCTGGGATCATAGCTGTGGACTTGGCAAGGGACATTCTTCAATCGAACCCCAATAACTATGCTGTGGTGGTGAGCACCGAGGTTGTGGGGTTCAACTGGTACCAGGGGAAAGAGAGGTCGATGCTCATTCCTAACTGTTTCTTTCGCATGGGGTGCTCTGCTACCTTGCTTTCCAACCGTCGTCGTGACTACAGCCGTGCCAAGTATCGTCTTGAGCACATTGTTAGGACGCATAAAGGTGCCGATGATCGCAGCTTCAGGTGTGTGTACCAAGAGGAAGATGAACAAAAATTCAAGGGATTAAAGATCAGCAAGGACTTGATTGAAATTGGTGGTGATGCTCTCAAAACCAATATCACTACACTAGGACCCCTGGTGCTACCCTTTTCTGAGCAGCTCCTATTTTTCGCCACCTTGGTTTGGAGGCACTTATTTGGTGGCAAATCCAATGGGAAGAACTCACCATCATTGAAGAAGCCATACATCCCTGACTACAAGCTGGCCTTTGAGCATTTCTGTGTGCATGCTGCAAGCAAGCCCATTCTTGATGAGCTGCAGAGGAACCTGGAACTGAGTGACAAGAACATGGAGGCATCAAGGATGACACTGCACCGATTTGGCAACACATCGAGCAGCAGCATTTGGTATGAGCTTGCTTACTTGGAGGCAAAGGAGAAGGTGAGAAGAGGGGACCGTGTTTGGCAACTTGCTTTTGGTTCTGGCTTCAAGTGTAACAGCATTGTTTGGCGTTCCATGCGCCGCATCACCAAGCCTACTAGGAACCCTTGGCTTGATTGCATCAACACATACCCTGTGTCTCTCACTTAA 1608 0.5012 MANERDLFSTEIVNRGIESSGPNAGSLTFSVRVRRRLPDFLQSVNLKYVKLGYHYLINHGIYLLTIPVLLVVFSAEVGSLSKEDLWKKLWEDARYDLATVLASFGVFVFTLSVYFMSRPRPIYLVDFACYRPEDDLKVSRDQFVELARKSGKFDEGSLEFQKRILMSSGIGDETYIPKAVIASNENTATMKEGRAEASTVMFGALDELFEKTRVRPKDVGILVVNCSIFNPTPSLSAMIINHYKMRGNILSYNLGGMGCSAGIIAVDLARDILQSNPNNYAVVVSTEVVGFNWYQGKERSMLIPNCFFRMGCSATLLSNRRRDYSRAKYRLEHIVRTHKGADDRSFRCVYQEEDEQKFKGLKISKDLIEIGGDALKTNITTLGPLVLPFSEQLLFFATLVWRHLFGGKSNGKNSPSLKKPYIPDYKLAFEHFCVHAASKPILDELQRNLELSDKNMEASRMTLHRFGNTSSSSIWYELAYLEAKEKVRRGDRVWQLAFGSGFKCNSIVWRSMRRITKPTRNPWLDCINTYPVSLT* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1905 535 PIRSF Very_long_ch_3-ktacl-CoA_syn 39 535 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dod09g1905 535 SUPERFAMILY Thiolase-like 332 511 IPR016039 GO:0016746
Dod09g1905 535 SUPERFAMILY Thiolase-like 108 326 IPR016039 GO:0016746
Dod09g1905 535 CDD CHS_like 98 509 - -
Dod09g1905 535 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 430 510 IPR013747 -
Dod09g1905 535 Coils Coil 442 462 - -
Dod09g1905 535 PANTHER 3-KETOACYL-COA SYNTHASE 4 532 IPR012392 GO:0006633|GO:0016020|GO:0016747
Dod09g1905 535 PANTHER 3-KETOACYL-COA SYNTHASE 10 4 532 - -
Dod09g1905 535 Pfam FAE1/Type III polyketide synthase-like protein 114 403 IPR013601 GO:0006633|GO:0016020|GO:0016747
Dod09g1905 535 Gene3D - 129 512 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1905 Dod-Chr9 40599161 40604663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1905 2 534 Miscellaneous Gene Families AT2G26250 76.770 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1905 K15397 - gmx:100818799 1005.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1905 09 40599161 40604663 Dod09g1905 09 40599161 40604663 ECH