Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1889 ATGAACGAGACGTTGAAGGCAGCTGCACGCATCGGAGATATAGACCTGCTGTACACACTCATTCAGGTGGATCCATATCTCTTGGAGCACATTGGTCAGATACCATTTGTTGATACTCCTTTGCATCTTGCGGCTGCTGCTGGCGAATCCAGTTTTGCCACTGAGATCATGAGGCTAAAGCCTTTGTTTGCATGGAAGCTAAATCAACACGGTCTTAGCCCCATGCACCTTGCCTTGCAAAATGGCCATTACGGAATGGTGTGCCGCTTCGTTGACATCAACAAAGACCTTGTCCGAGTCAAAGGGAAAGAGGGCCTTACTCCTTTGCATTTTGTGACCCAGATAGGAAGAACTGATCTAATAGCTAGATTCTTATCAGCTTGTCCAGGTTCTGTAGAAGATTTGACTGTTAGAAGCGAGACTGCTTTGCATATTGCTGTGAAACACAAACAGCTTGAGGCTCTTGAGGTCTTGGTTGGTTGGCTTCAGAGGACATGCCAAAAGCGATCTCAACATGTGGAAGATCGGGTTCTAAATTGGGAAGACGAGGCAGGCAACACTGTTCTCCACATTGCAGTACTCAAACGCTTACCACAGGCAGTTAGGTTGTTGATAGATAGCAACATAGATTTATATGCCAAGAACTTAGAGGACTCAACAGCTTTGGACATGGTAGAGATTAATCTTAGCCATGATCACAGTGCAGAGATCAGGGACATGTTACTTAGAGCTGGAGCTTTACGTGGTTCTGAAATTTCTGCTCCTCCACTCCAAGAAGATGAGCTAAGATCCAAAATCACCTTCCATGAAAGAGTAGCAGTCAGCGTTACACGCCTTAGAAGAAGAATATCAAACGACACGCGCAATGCATTGTTGGTAGTTGCTATTCTCTTTGCAACAAGCACATATGAAGCAGCACTTAGTCCCCCTGGTGGAGTTTATCAGGCTGAAGGTAGTTCCCTCGTTAGCAAGATTGGTACACCCCTAAGGCCAACTACAGATGGTGTTGCAACAAAGCAAGGCGCTGGGAAAGCGGTCATGGAAGTTGAGGAATTCGTTTGGTTCTGGTCATTTAACACCTTGGCCTTTTATCTATCAATTTTGATGATATGTTTACTCATGCCTAGAGGGCGCATCAGCGTTGTAGTCTGTTCTCCACTTACTTTATTTTCTGGTTGCTATGTGTTGTCCATGGTAGTGATATCACCAAGCCTTAGCATAGCAATTGCCACTGTGATTCTTCCATGCATGCTTTTGGCACTGTACTGTTGGGGAGCTTCAGTGTATCTTAGATTAGCCAAGAAACTCCGAAGATATGGCCTTAAACAGGAAGATTGGTCCAAGTTCTCAGGGGGAAACAAATGGTAA 1368 0.4503 MNETLKAAARIGDIDLLYTLIQVDPYLLEHIGQIPFVDTPLHLAAAAGESSFATEIMRLKPLFAWKLNQHGLSPMHLALQNGHYGMVCRFVDINKDLVRVKGKEGLTPLHFVTQIGRTDLIARFLSACPGSVEDLTVRSETALHIAVKHKQLEALEVLVGWLQRTCQKRSQHVEDRVLNWEDEAGNTVLHIAVLKRLPQAVRLLIDSNIDLYAKNLEDSTALDMVEINLSHDHSAEIRDMLLRAGALRGSEISAPPLQEDELRSKITFHERVAVSVTRLRRRISNDTRNALLVVAILFATSTYEAALSPPGGVYQAEGSSLVSKIGTPLRPTTDGVATKQGAGKAVMEVEEFVWFWSFNTLAFYLSILMICLLMPRGRISVVVCSPLTLFSGCYVLSMVVISPSLSIAIATVILPCMLLALYCWGASVYLRLAKKLRRYGLKQEDWSKFSGGNKW* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1889 455 Pfam Domain of unknown function 285 379 IPR026961 -
Dod09g1889 455 PANTHER ANKYRIN REPEAT PROTEIN 11 420 - -
Dod09g1889 455 SMART ANK_2a 184 213 IPR002110 GO:0005515
Dod09g1889 455 SMART ANK_2a 138 168 IPR002110 GO:0005515
Dod09g1889 455 SMART ANK_2a 36 65 IPR002110 GO:0005515
Dod09g1889 455 SMART ANK_2a 104 134 IPR002110 GO:0005515
Dod09g1889 455 SMART ANK_2a 70 99 IPR002110 GO:0005515
Dod09g1889 455 Pfam Ankyrin repeats (3 copies) 75 159 IPR002110 GO:0005515
Dod09g1889 455 ProSiteProfiles Ankyrin repeat profile. 184 216 IPR002110 GO:0005515
Dod09g1889 455 Gene3D - 1 257 IPR036770 -
Dod09g1889 455 PANTHER HOMEOBOX PROTEIN WARIAI 11 420 - -
Dod09g1889 455 Pfam Ankyrin repeats (many copies) 178 224 IPR002110 GO:0005515
Dod09g1889 455 SUPERFAMILY Ankyrin repeat 5 245 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1889 Dod-Chr9 40455065 40457414 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1889 1 390 Miscellaneous Gene Families AT4G10720 40.409 2.43e-89 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1889 - - gmx:100790227 637.876