Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1882 ATGAAGATAGCAGTGGAAGGGTGCATGCATGGCGACCTCGACAATGTCTACAAAACTCTCCAGAATCTCGAGAAATCCCACAACACCAAGATCGACCTCCTCCTCTGCTGCGGCGATTTCCAGGCTGTTAGGAACGAGGATGATTTGAAGAGCCTGAACGTTCCCCCGCGATATCGCTCCATGAATTCCTTCTGGAAGTACTATTCCGGCTTGGAGGTTGCGCCCTATCCAACCATCTTCATCGGTGGCAACCACGAAGCTTCCAATTATTTGTGGGAACTGTATTATGGAGGATGGGCTGCGCCTAATATATATTTCTTGGGAGTTGCTGGGGTGGTCAGGTTTGGGAATATCCGAATTGGTGGCATTTCTGGAATTTATAATGGTCGTCACTATAAATCAGGACACTTTGAGAGGCCTCCCTATGATCAAAGTACCATCAGGTCTGTGTATCATGTTCGTGAATATGATGTTCACAAACTCATGCAAGTTGAGGAACCTATTGATATCTTTCTTTCGCATGATTGGCCGGTGGGCATCACTGATTGTGGGGATTGGAAGGATCTTGTTCAGCGCAAGTTTTTTTTTAAGCAGGAGATAGAGGAGGGAAGACTTGGGAGTAGAGCTGCTGCTCAACTTCTAGGTAAATTGAAACCACAGTATTGGTTTTCTGCTCACTTACATTGCAAGTTTTCTGCTCTTGTTCAACATGGCGAAGGAGGCCCACTGACAAAATTCCTTGCACTTGATAAATGTCTTCCTGGGCGTGATTTCTTACAGATTGTAGAAATAGAATCAGGGGCAGGCCCTTATGAGATTCAGTATGATGAAGAATGGTTAGCTATAACAAGGAGGTTCAACTATATCTTCCCTCTGACAACCAAAGGGGCGGATTTCAGAGGTTTAAATCTTGAGATGGATGATTGTCACCAGTGGGTTAGAAGCAGGTTACAAGAGAGAGGGTGCAAACCTTTTGAATTTGTTAGAACAGCTCCATGTTATGATCCTTCTCAATCTAACTCTTATGGTTCTTCTGCTGTGTGTCCGCGGAATCCTCAGACAGAATCTCTTTTGCAGCTTTTAGAACTTCCATACCTACTTGATAAGAATCCTGAATCAAAGGACTTGTCATCTTATCCTTCGCCCTCAATTCAAAGAGTGAGGACATTCCTATTGATGATGTGGATGACGATGATGAAGACGTGGAAGCTTAGACTTCGAACTTGTGAATCGTCATTGCGATTAACATGCCGAATCGCTAATGGTCTGCTGCTTGCATTTTTTACTAAGTGCTTACACTATTGA 1305 0.4398 MKIAVEGCMHGDLDNVYKTLQNLEKSHNTKIDLLLCCGDFQAVRNEDDLKSLNVPPRYRSMNSFWKYYSGLEVAPYPTIFIGGNHEASNYLWELYYGGWAAPNIYFLGVAGVVRFGNIRIGGISGIYNGRHYKSGHFERPPYDQSTIRSVYHVREYDVHKLMQVEEPIDIFLSHDWPVGITDCGDWKDLVQRKFFFKQEIEEGRLGSRAAAQLLGKLKPQYWFSAHLHCKFSALVQHGEGGPLTKFLALDKCLPGRDFLQIVEIESGAGPYEIQYDEEWLAITRRFNYIFPLTTKGADFRGLNLEMDDCHQWVRSRLQERGCKPFEFVRTAPCYDPSQSNSYGSSAVCPRNPQTESLLQLLELPYLLDKNPESKDLSSYPSPSIQRVRTFLLMMWMTMMKTWKLRLRTCESSLRLTCRIANGLLLAFFTKCLHY* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1882 434 Gene3D - 7 244 IPR029052 -
Dod09g1882 434 Pfam Calcineurin-like phosphoesterase 1 229 IPR004843 GO:0016787
Dod09g1882 434 SMART DBR1_2 235 367 IPR007708 GO:0006397|GO:0016788
Dod09g1882 434 SUPERFAMILY Metallo-dependent phosphatases 1 253 IPR029052 -
Dod09g1882 434 CDD MPP_Dbr1_N 3 259 IPR041816 -
Dod09g1882 434 PANTHER RNA LARIAT DEBRANCHING ENZYME 1 378 - -
Dod09g1882 434 Pfam Lariat debranching enzyme, C-terminal domain 244 364 IPR007708 GO:0006397|GO:0016788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1882 K18328 - gmx:100812726 699.508