Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1881 ATGCAAGGTGTGAAGCCGTGGCAGATATCAAAGCTGAGCCTTTGGTTGATGGGGGAGAAGAAGATCACAAGGTTCTTGTGGGTCCTTCCACGGAGGAGGAGAGGGTGGTTGCTCACTATGACTGGACAGAGGAGTGGTACCCTTTATACCTCACTCAGAATGTGCCTGATGATGCACCCCGTCGGTCTCAAAGTCTTTGACAAGCAACTTGTCTTGTTCAGGGATCCCAATGGTGTCTTTCGATGTTATGAAGATCGTTGCCCCCACAGATTAGCAAAACTGTCTGAAGGTCAGTTGGTTGATGGAAGGCTCGAGTGCCTATACCATGGATGGCAATTTGAAGGTGATGGAAAATGTGTAAAGATTCCTCAGCTTCCAGCTGATGCCAAAATCCCTCGATCAGCTTGTCTTAGAACATATGAAGTGAAGGAGTCCCAAGGAGTTGTTTGGGTGTGGATGTCTCCAAAGACACCTCCAAATGTCAGTAAACTACCTTGGTTTGAGAACTTTGCAAGGCCAGGGTTTCAAGATGTTTCAACAATTCATGAACTCCCATATGATCACTCTATTCTCTTGGAAAATCTGATGGATCCCGCTCATATCCCAATCTCACATGATAGAACAGATTGGACTGCGAAAAGGGAGGACTGCACAGCCACTGTGTTTTGA 669 0.4649 MQGVKPWQISKLSLWLMGEKKITRFLWVLPRRRRGWLLTMTGQRSGTLYTSLRMCLMMHPVGLKVFDKQLVLFRDPNGVFRCYEDRCPHRLAKLSEGQLVDGRLECLYHGWQFEGDGKCVKIPQLPADAKIPRSACLRTYEVKESQGVVWVWMSPKTPPNVSKLPWFENFARPGFQDVSTIHELPYDHSILLENLMDPAHIPISHDRTDWTAKREDCTATVF* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1881 222 PANTHER IRON-SULFUR DOMAIN CONTAINING PROTEIN 59 220 - -
Dod09g1881 222 SUPERFAMILY ISP domain 60 160 IPR036922 GO:0051537
Dod09g1881 222 PANTHER PROTEIN TIC 55, CHLOROPLASTIC 59 220 - -
Dod09g1881 222 SUPERFAMILY Bet v1-like 146 215 - -
Dod09g1881 222 ProSiteProfiles Rieske [2Fe-2S] iron-sulfur domain profile. 52 151 IPR017941 GO:0051537
Dod09g1881 222 Gene3D - 49 170 IPR036922 GO:0051537
Dod09g1881 222 Pfam Rieske [2Fe-2S] domain 60 127 IPR017941 GO:0051537
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1881 Dod-Chr9 40388756 40390248 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1881 - - gmx:100808233 320.472
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1881 09 40388756 40390248 Dod09g1881 09 40388756 40390248 ECH