Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1878 ATGTTTCATTCTACGGGTGTTCAACAAGAACACCCTCTCGTCCTTGATTTTGCATCCCAAATTGGTCGCTTAGCAAATGATACCAAGTTCCTCAGCTTTGGCTCAGATAACTGCTCCTCAGTGTTGTCCAATTTCTTGCACTTAAATGCCAGAAAGCCAAGTACTCGTGCTGCTTCTCTGAGCTTGAAATTTGGGGGTAGAGGGGATGTGAGTTTCAGGAGGATTCTGAATGACTTCAACACAGCTATTAGGTTCCACAGTCAGAGATTCCCAATTGGATTTGACTCCCCGGGGATTGATTCTGGGGATAACAATCACAGTAATAATGGTACTATTGATGAGTATGGTGTTATCCAGGATGATAGGTTGACATTGAATGGTGTTGATTCTCAGAAGCCCAAAAGGGTTCTGATTTTGATGAGTGACACTGGCGGTGGACATAGAGCTTCTGCAGAAGCCATAAGGGCAGCTTTCTATGAAGAATTTGGGGACCAATACCAGGTGTTTGTTGTTGATTTGTGGTCTGATCACACGCCTTGGCCATTCAACCAACTTCCCAGGACCTATAGCTTTTTGGTGAAACATGGGTCATTGTGGAAAATGACCTACTATGGAACTGCCCCACGTGTGGTGCATCAGTCTAACTTTGCTGCAACTTCAACATTTATAGCTCGTGAGGTTGCTAGGGGGATAATGAAATATCAGCCAGATATAATAATCAGTGTGCATCCACTGATGCAACATGTACCACTTCGTATTTTGAGAGCTAGGGGTCTTTTGAAGAAGATCATTTTTACTACAGTTGTCACAGATTTAAGTACTTGCCATCCTACATGGTTTCATAAGCTCGTAACTAGATGCTATTGTCCTACCACAGACCTTGCAAAAAGGGCACTCAAAGCTGGACTCCAGCAATCACAAATAAAGATTTATGGACTACCTGTGCGACCTTCCTTTGTTAAGCCAGTTCGACCAAAGGATGAACTAAGGACAGAATTAGGTTTGGACAAGGATCTTCCTGCTGTATTACTAATGGGGGGAGGTGAAGGCATGGGCCCGATTGAGGCTACTGCTCGGGCACTTGGAGATATGTTATATGATGAGAGCCACGGGGTTCCCATAGGTCAAATACTTGTTATTTGTGGACGTAATAAGAAGCTTGCTGACAAATTGATTTCAATTAATTGGAAGGTTCCTGTGCAGGTAAAGGGATTTGTCACCAAAATGGAAGAATCCATGGGAGCTTGTGACTGCATCATTACAAAGGCGGGCCCAGGGACAATTGCGGAGGCAATGATTCGAGGCCTCCCTATTATTTTGAACGGTTATATTGCTGGGCAGGAAGCTGGTAATGTACCATACGTGGTTGAAAATGGATGTGGCAAGTTCTCCAAATCTCCAAAGGAGATAGCAAAAATTGTTGCGGACTGGTTTGGCCCAAAAGCTGAGGAACTAAAAGCAATGTCTCAAAATGCCTTGAGGTTGGCACGGCCAGATGCTGTGTTCAAGATCGTCCGTGACCTTGATGAGCTTGTCAGACAAAGAAGTTTTCATCCACAGTACACTTGTACAGCTTAA 1578 0.4404 MFHSTGVQQEHPLVLDFASQIGRLANDTKFLSFGSDNCSSVLSNFLHLNARKPSTRAASLSLKFGGRGDVSFRRILNDFNTAIRFHSQRFPIGFDSPGIDSGDNNHSNNGTIDEYGVIQDDRLTLNGVDSQKPKRVLILMSDTGGGHRASAEAIRAAFYEEFGDQYQVFVVDLWSDHTPWPFNQLPRTYSFLVKHGSLWKMTYYGTAPRVVHQSNFAATSTFIAREVARGIMKYQPDIIISVHPLMQHVPLRILRARGLLKKIIFTTVVTDLSTCHPTWFHKLVTRCYCPTTDLAKRALKAGLQQSQIKIYGLPVRPSFVKPVRPKDELRTELGLDKDLPAVLLMGGGEGMGPIEATARALGDMLYDESHGVPIGQILVICGRNKKLADKLISINWKVPVQVKGFVTKMEESMGACDCIITKAGPGTIAEAMIRGLPIILNGYIAGQEAGNVPYVVENGCGKFSKSPKEIAKIVADWFGPKAEELKAMSQNALRLARPDAVFKIVRDLDELVRQRSFHPQYTCTA* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1878 525 Pfam Monogalactosyldiacylglycerol (MGDG) synthase 147 315 IPR009695 GO:0009247|GO:0016758
Dod09g1878 525 Gene3D Glycogen Phosphorylase B; 325 496 - -
Dod09g1878 525 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 88 515 - -
Dod09g1878 525 CDD GT28_Beta-DGS-like 136 513 - -
Dod09g1878 525 PANTHER MONOGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 88 515 - -
Dod09g1878 525 Pfam Glycosyltransferase family 28 C-terminal domain 376 440 IPR007235 GO:0016758
Dod09g1878 525 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 134 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1878 Dod-Chr9 40373196 40377079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1878 4 525 Glycosyltransferase AT4G31780 66.487 0.0 726
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1878 K03715 - gmx:547469 816.994
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1878 09 40373196 40377079 Dod09g1878 09 40373196 40377079 ECH