Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1867 ATGATATTAATGTCGAGCCTTTATGAATTGCAGTTCCCTCTATTGTCCAAGAGCAACCGGTTACAAAAGTTGGTGTCAGCAAAAGCTAACGAAGAGGATTCTGATGACATTTACTTAGATAATTTCCCGGGAGGGCCTAATGCCTTTGGAATGTGTGCAAAATTCTGTTATGGAATGACTGTTACTCTTAATGCTTACAATGTTGTAGCCGCTCGTTGTGCAGCTGAGTATCTCGAGATGACAGAGGATACTCAATGGGGAAACTTAGTTTTTAAAATTGAAGTGTTTCTTAACTCAGGTATCTTCAGTTGCTGGAAGGATTCTATAATTGTTCTCCAAACTTCAAAATCACTTCTGCCGTGGTGTGAGGATTTGAAGATCATAGGGAGATGCATCGATTCCATAGCTTGTAAGACTAGTGTGGACCCAGCAAACATTTTTTGGTCCTACACTTATAACAGGAAATTAACAGGGTGTGATAAAATTGTTGAGGACAAGATGAAATTTGGAGACAACAATAACGATGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGATATATGTGAGCTGGACATTGATCTTTACAAAAGAGTAATGATTGCTGTGAAATCAAAGGGAAGAATGGATAGTTTTGTGATTGGGGAAGCACTAAAAGTCTATGCAGGGAGATGGCTACCTGATTCCATTGATGCATTGATTTCTGATGCATCAAGGAACAAATCCCTGGTAGAAACAATTGTCTGTTTATTGCCATGTGATAATGGTGTGGTTTGTTCATGTAGTTTCTTGCTGAAGCTACTGAAAGTGGCCCTAGTAGTCAAAGCAAATCAGTCGACACGAGAAGAATTGATGAGGAGAATTGGCCAAAAATTGCATGAAGCTTGTGTCAAAGATTTATTGATTCCATCAAGGTCTCCCCATATTACCACATATGATGTTGATTTGGTACAAGGTCTTTTGAATCAATACATGATTCGTGAAAAGGGTAGATGCAATATGGAGGTTGTTGAGGAGAAAGACAAAGGAAAAGATCAGTGCATTTTAGGTCATAGGTCCTTATTGAAAGTTGGCAAGTTGGTGGATGGTTACCTTGCAGAAATTGCTCACGATCCTAACCTCAGTCTCTCTAGTTTTGTTGATTTGTCACAATCAATTCCAGATTATGCCAGATCGAATCACGGAGGTCTGTACAGAGCCATCGACATCTACTTGAAGGAGCATCCAGATTTGACAAAAGCTGAGAGGAAGAAGTTATGTGGACTAATGGATGTCAAGAAGTTTACAGTGGATACTTGTATGCATGCTGCCCAGAATGAGCGCCTTCCTCTTCGAGTTGTGGTGCAGGTTCTCTTTTTTGAGCAGCTCAGAGCTTCTGCAAGAGTTCAAGCAACCGTTAACAATTCACATGATCCTTTAGGCAACGGACGTGGGAAGACAGTGGTAACGCGATGCCAATCCCTCAACATTCAGATGAGTCATTTGAGGATCAAAGATGAAGAGTTGAATAAAAATAATGGCAAGTAG 1524 0.4035 MILMSSLYELQFPLLSKSNRLQKLVSAKANEEDSDDIYLDNFPGGPNAFGMCAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDTQWGNLVFKIEVFLNSGIFSCWKDSIIVLQTSKSLLPWCEDLKIIGRCIDSIACKTSVDPANIFWSYTYNRKLTGCDKIVEDKMKFGDNNNDESVPKDWWVEDICELDIDLYKRVMIAVKSKGRMDSFVIGEALKVYAGRWLPDSIDALISDASRNKSLVETIVCLLPCDNGVVCSCSFLLKLLKVALVVKANQSTREELMRRIGQKLHEACVKDLLIPSRSPHITTYDVDLVQGLLNQYMIREKGRCNMEVVEEKDKGKDQCILGHRSLLKVGKLVDGYLAEIAHDPNLSLSSFVDLSQSIPDYARSNHGGLYRAIDIYLKEHPDLTKAERKKLCGLMDVKKFTVDTCMHAAQNERLPLRVVVQVLFFEQLRASARVQATVNNSHDPLGNGRGKTVVTRCQSLNIQMSHLRIKDEELNKNNGK* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1867 507 ProSiteProfiles NPH3 domain profile. 181 456 IPR027356 -
Dod09g1867 507 SUPERFAMILY POZ domain 12 82 IPR011333 -
Dod09g1867 507 Pfam NPH3 family 181 432 IPR027356 -
Dod09g1867 507 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN NPY1 7 502 IPR029961 GO:0060918|GO:0099402
Dod09g1867 507 PANTHER OS12G0117600 PROTEIN 7 502 IPR043454 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1867 Dod-Chr9 40303954 40306113 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1867 11 503 EF-hand Containing Proteins AT3G44820 32.096 3.07e-82 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1867 - - gmx:100812575 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1758 08 41856621 41859734 Dod09g1867 09 40303954 40306113 PCT