Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1856 ATGTCGATTTTACCGAAAGGCGATTCGGTTCAAATCAGGGAGGTATGGAACGATAACCTAGAAGAGGAGTTCGCGTTGATCCGCGAAATCGTTGACGAATACAACTACGTCGCGATGGACACGGAGTTCCCCGGCGTTGTTCTTCGTCCCGTGGGGAACTTCAAGAACATCAACGACTATAACTACCAGACTCTGAAGGACAACGTTGACATGCTGAAGCTGATCCAATTAGGCCTCACCTTCTCCGACGAAAACGGGAGCCTCCCTACCTGCGGCACCGAGAGTCCATGCATCTGGCAATTCAACTTCCGCGAGTTCAACATCAGCGAGGACATCTTCGCAAGCGATTCGATCGAGTTGCTGCGCCAATGCGGCATCGATTTCAAGAAGAACAACGAGAAAGGTATCGACGTGAACCGATTCGGTGAGCTCCTCATGTCTTCCGGGATCGTGTTGAATGACAGCGTGAATTGGGTGACGTTTCACAGCGGTTACGATTTCGGTTACCTCCTGAAGCTGTTAACGTGCCGGAGCTTGCCGGAGACGCAGGCAGGGTTCTTCGACCTGATCAAGATGTATTTCCCAATGGTGTATGATATCAAGCACTTGATGAAGTTCTGCAACAGCCTCCACGGCGGTTTGAACAAGCTCGCGGAGCTGTTGGAGGTTGAGAGAGTTGGTGTTTGCCATCAAGCTGGATCGGATAGCTTGCTTACTTGTTGTACATTTAGAAAGTTGAGGGATACGTTCTTCAATGGGTCCACAGAGAAATATGCTGGTGTCTTGTATGGTTTAGGTGTTGAGAATGGACAGACTAATTGA 822 0.4951 MSILPKGDSVQIREVWNDNLEEEFALIREIVDEYNYVAMDTEFPGVVLRPVGNFKNINDYNYQTLKDNVDMLKLIQLGLTFSDENGSLPTCGTESPCIWQFNFREFNISEDIFASDSIELLRQCGIDFKKNNEKGIDVNRFGELLMSSGIVLNDSVNWVTFHSGYDFGYLLKLLTCRSLPETQAGFFDLIKMYFPMVYDIKHLMKFCNSLHGGLNKLAELLEVERVGVCHQAGSDSLLTCCTFRKLRDTFFNGSTEKYAGVLYGLGVENGQTN* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1856 273 Gene3D - 2 269 IPR036397 GO:0003676
Dod09g1856 273 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED 1 272 - -
Dod09g1856 273 Pfam CAF1 family ribonuclease 15 136 IPR006941 -
Dod09g1856 273 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 1 272 IPR039637 GO:0004535|GO:0030014
Dod09g1856 273 SUPERFAMILY Ribonuclease H-like 12 265 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1856 Dod-Chr9 40173942 40175604 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1856 K12581 - gmx:100785970 547.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1856 09 40173942 40175604 Dod09g1856 09 40173942 40175604 ECH