Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1852 ATGCTGCGTAAACTGGTGGCGGTGCCTGGGAAGAAGAAGCCTGGAACAGTTCCCGTTTATCTCAACGTCTATGATCTCACCCCGATTAATGGCTATGCCTATTGGCTTGGCCTTGGAGTCTACCATTCTGGGGTTCAAGTTCATGGAATTGAGTATGGTTTTGGAGCGCATGAACATGACACAACGGGGATTTTTGAGGTGCAGCCAAGACATTGTCCTGGTTTCACTTTCAGAAAATCAATTATCATAGGAACAACAGATCTGGGACCTAAAGATGTACGGGCATTTATGGAGAAACTAGCTCAAGAGTACTCTGGGAACGCCTATCATCTCATCTCTAAAAACTGCAACCACTTCTGTAATGATGTTTGCCTCAAATTGACGGGAAAGTCTATCCCTCGTTGGGTGAATCGACTTGCTCGACTTGGTCTTCTCTGCAACTGCGTCCTTCCCCCTGGACTAAATGACACAAAGGTTAGGCAAGTTACAGTGGACAAGGTTCAGGATGAAGAAAAGAAGAAAATGAGAAGCCAGTCATGTAGGTACGAGGAAAGACACCGCCGTCGAGGATCAGCAATTAAAAGTAGCAGCCAAAGACATTGCCTTCCTCCATCTTCATCTTTGATTAATGCTTCTTCAGCCTCAACCTTAACAGTAAAGTAA 663 0.451 MLRKLVAVPGKKKPGTVPVYLNVYDLTPINGYAYWLGLGVYHSGVQVHGIEYGFGAHEHDTTGIFEVQPRHCPGFTFRKSIIIGTTDLGPKDVRAFMEKLAQEYSGNAYHLISKNCNHFCNDVCLKLTGKSIPRWVNRLARLGLLCNCVLPPGLNDTKVRQVTVDKVQDEEKKKMRSQSCRYEERHRRRGSAIKSSSQRHCLPPSSSLINASSASTLTVK* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1852 220 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Dod09g1852 220 MobiDBLite consensus disorder prediction 174 191 - -
Dod09g1852 220 PANTHER DESUMOYLATING ISOPEPTIDASE 2 218 IPR008580 GO:0008233
Dod09g1852 220 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Dod09g1852 220 PANTHER THIOL PEPTIDASE FAMILY PROTEIN, PUTATIVE-RELATED 2 218 - -
Dod09g1852 220 MobiDBLite consensus disorder prediction 174 220 - -
Dod09g1852 220 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Dod09g1852 220 MobiDBLite consensus disorder prediction 195 220 - -
Dod09g1852 220 Gene3D PPPDE domains 12 174 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1852 Dod-Chr9 40120345 40122877 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1852 K22763 - gmx:100306675 383.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1852 09 40120345 40122877 Dod09g1852 09 40120345 40122877 ECH
Dod08g1725 08 41054322 41056381 Dod09g1852 09 40120345 40122877 PCT