Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1833 ATGAATTTCAGTATGGTTATAGATTTTCCTGGAGGACCGGTGAAATTTATCCCTGAAATGAGCTTTATATCTGAATCACCTCAAGAGAGAATACCCTGCTACCGTGTTCTTGATGACAATGGGCATCTGATTTTCGGCAGTAATTCTGTCCAGGTCAGTGAGGCAGTTGCTTTAAAGATGTATCATGACATGGTTACACTTCAAACAATGGACACCATCTTCTATGAAGCACAGAGGCAAGGTAGAATATCTTTTTATTTAACAACAATCGGAGAAGAGGCTATCAATATTGCATCAGCTGCAGCTCTTACAATGGATGATGTTATTTTCCCTCAGTATAGGGAACCAGGACCCCTGCTATGGCGTGGCTTCACTTTGCAAGAATTTGCAAACCAGTGTTTCTCCAATAAATATGATAATGGGAAAGGAAGACAGATGCCGATCCATTATGGGTCTAGCAGGCTTAATTACTTTACTGTAGCATCAACCGTTGCTACACAAGTTCCCCACGCTGTTGGAGCTGCATATTCCTTTAAAATGGACAAAAGGGACGCATGTGCGGTCACTTATTTTGGTGATGGTGGCTCAAGTGAGGGAGATTTCCATGCTGCCTTAAATTTTGCAGCTGTGATGGAGGCTCCAGTTATTTTTTTATGCCGGAATAATGGATGGGCTATCAGCACCCCTACTTCAGATCAGTTTCGAAGTGATGGTGTTGCTGTGAAAGGACAGGCATATGGAGTTCGTAGCATCCGTGTAGATGGCAATGATGCCCTGGCCATATATAGTGCTGTTAAAGCTGCTCGGCAAATGGCAGTTAGTGAAGAGAGACCAGTTCTAATAGAAGCTCTTACATATAGAGTGGGGCACCACTCCACATCGGATGACTCCACCAAGTATCGTCCTGCCAATGAGATGGAATGTTGGAGATTGGCTCGAGATCCTGTGGCCAGATTTAGAAAGTGGATAGAAAGGAATGGTTGGTGGAATGGTACTGCTGAGACAGAGCTTAGGAACAGTCAGAGACAGAAGGTAAAATACTCATGCCTAAAAATCCATTGGTTGGTAATGGATACGACATTACTATATCAAATATCTTAA 1101 0.4296 MNFSMVIDFPGGPVKFIPEMSFISESPQERIPCYRVLDDNGHLIFGSNSVQVSEAVALKMYHDMVTLQTMDTIFYEAQRQGRISFYLTTIGEEAINIASAAALTMDDVIFPQYREPGPLLWRGFTLQEFANQCFSNKYDNGKGRQMPIHYGSSRLNYFTVASTVATQVPHAVGAAYSFKMDKRDACAVTYFGDGGSSEGDFHAALNFAAVMEAPVIFLCRNNGWAISTPTSDQFRSDGVAVKGQAYGVRSIRVDGNDALAIYSAVKAARQMAVSEERPVLIEALTYRVGHHSTSDDSTKYRPANEMECWRLARDPVARFRKWIERNGWWNGTAETELRNSQRQKVKYSCLKIHWLVMDTTLLYQIS* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1833 366 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA, MITOCHONDRIAL 5 346 - -
Dod09g1833 366 PANTHER 2-OXOISOVALERATE DEHYDROGENASE SUBUNIT ALPHA 2, MITOCHONDRIAL 5 346 - -
Dod09g1833 366 CDD TPP_E1_PDC_ADC_BCADC 60 346 - -
Dod09g1833 366 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 31 346 IPR029061 -
Dod09g1833 366 Gene3D - 3 351 - -
Dod09g1833 366 Pfam Dehydrogenase E1 component 64 346 IPR001017 GO:0016624
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1833 Dod-Chr9 39899431 39904627 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1833 2 237 Acyl Lipid Metabolism Gene Families AT5G09300 80.085 5.95e-143 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1833 K00166 - gmx:100779198 585.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1833 09 39899431 39904627 Dod09g1833 09 39899431 39904627 ECH