LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod09g1809	ATGAAAAGGATATGCTGTCTTTTACCTGGTTGTACGTATGGTCTGACAGATGCAGAATCTGAAGAGCTGAGAATTTTGAGGGAGAATACAAATTATTGGAAAGTAAAAAAGATAAATTCAACAGAGCAGAGAATTGGAGGATTTTGTCCACTGACTCCAAAGGAGGTGGGCATTTTTCTTCAAGCTCTTGGGTTTCCCTCATCAACACCAATATACATTGCAGCAGGGGAGATCTATGGTGGTAACACTCATCTTTCAGAGCTCTCCTCCCGCTTCCCTAGTCTAGTCTTTAAGGAATCCCTGGCAACCCCTGAAGAGCTGAAAGCTTTCACCAATCATGCATCTCAAACTGCTGCACTGGATTACATAATCTCTGTAGAGAGTGATGTATTTGTTCCTTCACATTCAGGAAATATGGCAAGAGCTGTTGAGGGACACCGAAGATTCTTAGGTCATCGCAAGACAATCAATCCAGACAGGAAAGGACTTGTTGAAATTTTTGATAAGCTGGAAACTGGAGAGCTAAAAGAAGGAGCGGAACTGTCACATCTTGTGCAGCAGATGCACCAGAACAGGGAAGGAGCTCCAAGGAAAAGACAAGGTTCCCCTCCAGGAGTTAAAGGCCGAGCACGTTTTAGGGCTGAAGAGTCCTTTTATGAAAATCCATACCCTGAGTGTATATGTGGTTCTAGAAACAAACTGGAAATTACTTGA	714	0.43	MKRICCLLPGCTYGLTDAESEELRILRENTNYWKVKKINSTEQRIGGFCPLTPKEVGIFLQALGFPSSTPIYIAAGEIYGGNTHLSELSSRFPSLVFKESLATPEELKAFTNHASQTAALDYIISVESDVFVPSHSGNMARAVEGHRRFLGHRKTINPDRKGLVEIFDKLETGELKEGAELSHLVQQMHQNREGAPRKRQGSPPGVKGRARFRAEESFYENPYPECICGSRNKLEIT*	238

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod09g1809	237	MobiDBLite	consensus disorder prediction	189	210	-	-
	Dod09g1809	237	Pfam	GDP-fucose protein O-fucosyltransferase	10	149	IPR019378	-
	Dod09g1809	237	PANTHER	OS02G0726500 PROTEIN-RELATED	9	232	-	-
	Dod09g1809	237	PANTHER	O-FUCOSYLTRANSFERASE 38	9	232	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod09g1809	Dod-Chr9	39646398	39648046	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dod09g1809	10	228	Miscellaneous Gene Families	AT1G22460	60.274	1.14e-97	294

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod09g1809	-		-	mtr:MTR_3g096020	424.091

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Dod09g1809	09	39646398	39648046	Dod09g1809	09	39646398	39648046	ECH