Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1800 ATGAGAGGAACAATGGGTAATTCTCCTTATGCCGTTGAAGCTCGACCCCGTTTGCCTGCATCCATTGAAGATTTATACAAACGAAGAATGCCAAGAAGTAAAGTGAGAGATATAGAGAAACCTTTTCACTTATCTACACAAGATAGGAGCTCAAGATGCAAGTTTTCTTTCTTAAAACTTATCCTATTGATAACCATTTGTGGCACTTTCGTAACGCTCCTGTACTCTCCAGAGGTTTACAATACCAACCATTTATCAAGCTCTGGCTCTCGGTGGATATGGGGTGCCTCAGATCCTCGGTATATTCCGAATGTAGATACCGACTGGGGTGATATAGTGAGAATCACTAAGAAGCTGACTGGGGAAAATGATTTTCAAGGCATTGGCCTTCTGAATTTCAACAAGACTGAAATAAGCCGCTGGGAGCATCTTGTTCCTGATGCCACACATGTTATCCTGCACTTGGAAGATGCTGCAAGAAATGTGACATGGGAGTCCCTATACCCGGAATGGATTGACGAGGAAGAAGAAAAAGAAGTTCCAGTTTGCCCTTCTCTACCGAGTCTTGTTTCTCCTGGGATAAGACTTAACCTCATTGCTGTCAAGCTTCCTTGCCGAAATGGTGATGGTGGGAATTGGTCTAGAGATGTTGCACGCTTGCACCTACAGCTTGCAGCTGCTCGCCTCGCAGCCTCTTTCAAAGGCAACTACACTGTCTATGTGCTCTTCATTACCAACTGCTTTCCAATACCGAATTTGTTTCCCTGCAAAGAACTAGTTGGACGTGAAGGGGATGCATGGTTGTACAGACCAAACCTTAGTGTCATGAGAGAAAAGGTTCAGCTCCCTGTAGGATCCTGTGAACTTGCGCTTCCTATGAGGGGCAAAGAGCTGGTTTACAATGGGAATGCTCACAGAGAAGCCTATGCAACAATTCTGCATTCAGCTCATGTTTATGTTTGTGGAGCTATAGCTGCTGCACAAAGCATCCGCATGTCAGGATCAACACGAGACCTTGTAATACTTGTTGATGAGACAATCAGTGGATATCACAGAAGTGGTTTGGAAGCAGCAGGGTGGAAAGTCAGAACAATAAAGAGGATCCGAAACCCGAAAGCCGAAAAAGATGCTTACAACGAGTGGAACTACAGCAAGTTCCGGCTATGGCAGCTGACAGATTACGACAAGATAATATTCATAGATGCAGATTTGCTCATACTAAGAAACATAGATTTCCTCTTTGGCATGCCAGAAATCACTGCTACAGGAAACAATGCCACACTATTCAATTCAGGTGTCATGGTGGTTGAGCCATCAAACTGCACATTCAACCTCCTGATGGAACATATTAATGAGATTGAGTCCTACAATGGAGGGGACCAAGGATATCTAAATGAAATATTTACATGGTGGCACAGGATACCAAGGCACATGAACTTCTTGAAGCATTTTTGGGTTGGTGATGAAGAAGAGAAGAAACAAATGAAAACTATGCTATTTGGTGCTCAGCCTCCAATCCTCTATGTCCTTCACTATCTAGGGTTGAAGCCTTGGTTATGCTTCCGGGACTATGACTGTAACTGGAATGCAGATATATTCCACGAGTTTGCGAGTGATGTTGCACATGCAAAGTGGTGGAAGGTGCATGATGCAATGCCTGAGGTGTTGCAGCAGTTTTGCATGTTGAAGTCAAAGCAGAAGGCACAGTTAGAGTGGGATCGTCGGCAGGCTGAGATAGCAAACTACACCGATGGGCATTGGAGAATTAAGGTTAAAGATCCGCGCTTGAAGAAATGCATAGATAATCTGTGCAACTGGAAAAGCATGTTGCGGCACTGGGGAGAGACAAATTGGACTGATGATGAGTCTTACACTCCAACGCCACCTGCCGTTACCACAACATCTCTTTCTGCTTTGTAA 1920 0.4432 MRGTMGNSPYAVEARPRLPASIEDLYKRRMPRSKVRDIEKPFHLSTQDRSSRCKFSFLKLILLITICGTFVTLLYSPEVYNTNHLSSSGSRWIWGASDPRYIPNVDTDWGDIVRITKKLTGENDFQGIGLLNFNKTEISRWEHLVPDATHVILHLEDAARNVTWESLYPEWIDEEEEKEVPVCPSLPSLVSPGIRLNLIAVKLPCRNGDGGNWSRDVARLHLQLAAARLAASFKGNYTVYVLFITNCFPIPNLFPCKELVGREGDAWLYRPNLSVMREKVQLPVGSCELALPMRGKELVYNGNAHREAYATILHSAHVYVCGAIAAAQSIRMSGSTRDLVILVDETISGYHRSGLEAAGWKVRTIKRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFGMPEITATGNNATLFNSGVMVVEPSNCTFNLLMEHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWVGDEEEKKQMKTMLFGAQPPILYVLHYLGLKPWLCFRDYDCNWNADIFHEFASDVAHAKWWKVHDAMPEVLQQFCMLKSKQKAQLEWDRRQAEIANYTDGHWRIKVKDPRLKKCIDNLCNWKSMLRHWGETNWTDDESYTPTPPAVTTTSLSAL* 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1800 639 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 304 554 IPR029044 -
Dod09g1800 639 SUPERFAMILY Nucleotide-diphospho-sugar transferases 307 552 IPR029044 -
Dod09g1800 639 PANTHER UDP-GLUCURONATE:XYLAN ALPHA-GLUCURONOSYLTRANSFERASE 1 20 616 - -
Dod09g1800 639 PANTHER GLYCOGENIN SUBFAMILY MEMBER 20 616 - -
Dod09g1800 639 CDD GT8_Glycogenin 307 552 - -
Dod09g1800 639 Pfam Glycosyl transferase family 8 313 519 IPR002495 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1800 Dod-Chr9 39596092 39604165 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1800 13 639 Glycosyltransferase AT3G18660 66.615 0.0 875
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1800 K20890 - gmx:100809361 1205.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1800 09 39596092 39604165 Dod09g1800 09 39596092 39604165 ECH