Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1764 ATGGAGAACGCGGGGAATTTAGATGCGGTGATAGAGCAGCTGTTGAATGAGGAGAAGCATGCGAGGCTGGCCGGAGACGTTGGCGCCACCAGGAAGGCCGTCACGGAGATCCTACGGCTGTGCTTCGAAGCGCGAGCATGGAAAACCCTCAACGACCAGATTGTTCTCTTGTCCAAGCGACGTGGTCAGCTTAAGCAGGCTGTAACAGCAATGGTCCAGCAGGCAATGCAATACATTGATGAGACACCTGATCTTGAAACTCGTATAGAACTCATCAAAACCTTGAACAGTGTTTCTGCAGGGAAGATATATGTTGAGATTGAGAGAGCTCGATTGATCAAGAAACTTGCAAAGATTAAGGAGGAACAAGGGCATATAGCTGAAGCTGCTGATTTGATGCAAGAAATTGCGGTGGAAACTTTTGGTGCCATGGCAAAAACTGAGAAAATTGCTTTCATTCTTGAACAAGTTCGGTTGTGCCTAGACCGTCAAGATTACATTCGTGCACAAATACTCTCAAGAAAAATTAGCACAAGGGTATTCGATGCTGATGCTTCAAAGGAAAAGAAAAAACCTAAAGAAGGTGATAATGTTGTTGAAGAAGCTCCTGCAGATATACCATCTCTTGCAGAGTTGAAGCGGATCTATTATGAACTAATGATTCGGTACTATTCCCATAAAAATGATTATCTTGAAATTTGCCGTTGCTACAAGGCAATATATGAGATTCCATCTGTCAAAGAAAATCCTGCCGAGTGGATGCCAATCCTGAGGAAAATATGTTGGTACTTGGTTCTATCACCACATGATCCAATGCAGTCAAGCCTTCTCAATTCCACCTTGGAGGATAAGAATCTCTCTGAGATTCCAAACTTTAAGTTACTGTTGAAACAGTTGGTCACAATGGAGGTTATCCAATGGACAAGCCTTTGGGATGCGTACAAGAATGAGTTTGAGAATGAGAAGAATTTTGGAAAATCTCTGGGTGAAAAAGCAGCAGAAGATCTGAGGGAAAGAATAATTGAACATAATATTATTGTCGTATCAAAATACTATGCGAGGATTACTTTGAAGAGACTTGCACAGCTTTTGTGTCTCAGTATTCAGGAAGCTGAAAAGCATCTCTCAGATATGGTTGTGTCCAAGGCGCTAGTGGCAAAGATTGATAGGCCCATGGGAATAGTTTGTTTTCAAACAGCCAAGGATAGCAATGATATTCTCAATTCATGGGCAGCAAACTTGGAGAAACTGCTCGACCTTGTGGAGAAGAGCTGTCATCAAATACATAAGGAAACTATGGTGCATAAAGCTGCTCTGAAGGCTTAA 1326 0.4231 MENAGNLDAVIEQLLNEEKHARLAGDVGATRKAVTEILRLCFEARAWKTLNDQIVLLSKRRGQLKQAVTAMVQQAMQYIDETPDLETRIELIKTLNSVSAGKIYVEIERARLIKKLAKIKEEQGHIAEAADLMQEIAVETFGAMAKTEKIAFILEQVRLCLDRQDYIRAQILSRKISTRVFDADASKEKKKPKEGDNVVEEAPADIPSLAELKRIYYELMIRYYSHKNDYLEICRCYKAIYEIPSVKENPAEWMPILRKICWYLVLSPHDPMQSSLLNSTLEDKNLSEIPNFKLLLKQLVTMEVIQWTSLWDAYKNEFENEKNFGKSLGEKAAEDLRERIIEHNIIVVSKYYARITLKRLAQLLCLSIQEAEKHLSDMVVSKALVAKIDRPMGIVCFQTAKDSNDILNSWAANLEKLLDLVEKSCHQIHKETMVHKAALKA* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1764 441 SMART PINT_4 331 417 IPR000717 -
Dod09g1764 441 Gene3D - 327 406 IPR036388 -
Dod09g1764 441 Pfam PCI domain 290 398 IPR000717 -
Dod09g1764 441 Pfam 26S proteasome regulatory subunit RPN5 C-terminal domain 404 436 IPR040896 -
Dod09g1764 441 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 1 441 IPR040134 -
Dod09g1764 441 SUPERFAMILY "Winged helix" DNA-binding domain 329 407 IPR036390 -
Dod09g1764 441 SMART motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 331 417 - -
Dod09g1764 441 ProSiteProfiles PCI domain profile. 232 402 IPR000717 -
Dod09g1764 441 PANTHER 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12 HOMOLOG A-LIKE 1 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1764 Dod-Chr9 39305454 39310821 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1764 K03035 - gmx:100793755 808.905