Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1756 ATGGCTTCAACTTCAATCTCCGCTTTGTCCATTTTCTACTCGCAATGCAAACCACCATTCGTCAATTCCAAATCCTCAAGCTATGCCGTACCAAATTCCCTTCACAGGCATTACTACAAACACCTTCCAGTCTCATTTCAACTACACACAATTCGCACCACCCTTTTGCCAAAACTTACTTGTTCCCACACTCCTTCCGCACCCGCACCCACCTCTTCTAACTCACCTCGAAGAATCTTATCTCAGTTCGTCTCGGAAAAGATAGCTTCTTTCCTCATTGGGTCGTTCATATTGGTGGCTTGCTTCGGAAACAGAGCCGCTGTGGCTGTAACACCACCTGCTGCAGTTTCTGGTGGAGTGTTGGCGGAGGAGAAGAGCGAGGAGGAGCGGGAGGAGATGTGCGAGAAGATTCTGGAGAAGGACCCGAAGAATGTTGAGGCTCTTAAGGTGATTTTGTATGGGAAGATTAGGAGAGGGAAGGCCGGTGAGGCTGTTAAGTTTGTGGAGAATTTGATTAAGGTGGAGCCTAATGAGGTTGAGTGGAGGCTTTTGCTTGCACTCTGTTATGAGACTATGGGGCACTTCACAAAGGCTAAGAGATTGTTCAGGGAAATCTTGCAGAAAAAGCCCCTTTTGGTGAGAGCTCTCCATGGTCTGGCTATGGTGATGCACAAAAATCATGAAGGCCCTGTTGTATTTGAGATGCTGAATAAGGCCCAAGAGCTAGCTGCTCGTGAAGAAAGAGTTACAGAGGAGAGAGATATAAGAATCTTAATTGCACAAATGTTTGTCGTACAGGGGAATTTGGAGGAGGGCTTAAAAAGATTTCAAGGTTTGGTTAATGAAAATCCTCGAGATTTTAGGCCTTATCTTTGCCAGGGAATTATATACAGCCTCCTGGATAAAAAGGAGGAAGCTGCACAGCAGTTTGAAACATATCAAGCTCTTGTGCCTGAAGAGTTTCCACAGAGGGGATTTCTCGATGATGTTGCCGTAACAGCAAAACGAACATCCAGAGAACAGCTTCAGAAGGAATTTGGACAATATTCGTATCGGAAGTAG 1062 0.4557 MASTSISALSIFYSQCKPPFVNSKSSSYAVPNSLHRHYYKHLPVSFQLHTIRTTLLPKLTCSHTPSAPAPTSSNSPRRILSQFVSEKIASFLIGSFILVACFGNRAAVAVTPPAAVSGGVLAEEKSEEEREEMCEKILEKDPKNVEALKVILYGKIRRGKAGEAVKFVENLIKVEPNEVEWRLLLALCYETMGHFTKAKRLFREILQKKPLLVRALHGLAMVMHKNHEGPVVFEMLNKAQELAAREERVTEERDIRILIAQMFVVQGNLEEGLKRFQGLVNENPRDFRPYLCQGIIYSLLDKKEEAAQQFETYQALVPEEFPQRGFLDDVAVTAKRTSREQLQKEFGQYSYRK* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1756 353 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 5 16 345 - -
Dod09g1756 353 Pfam Tetratricopeptide repeat 157 216 - -
Dod09g1756 353 PANTHER OS05G0182100 PROTEIN 16 345 - -
Dod09g1756 353 Gene3D Tetratricopeptide repeat domain 116 336 IPR011990 GO:0005515
Dod09g1756 353 SUPERFAMILY TPR-like 142 318 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1756 Dod-Chr9 39216426 39220261 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1756 - - gmx:100795327 426.402