Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1749 ATGGCGACCGTGATGCAGAAAATCAAAGACATCGAAGATGAGATGGCAAGGACTCAAAAGAACAAGGCTACTGCTCATCATTTGGGCTTGCTGAAGGCTAAACTTGCAAAGCTGCGGAGGGAACTCCTTACACCTACATCAAAAGGAGGTGGAGGTGCTGGTGAAGGTTTTGATGTCACTAAAAGTGGTGATTCAAGAGTTGGTCTTGTAGGCTTCCCTTCAGTTGGCAAATCTACTCTTCTGAATAAATTGACTGGGACATTTTCAGAGGTTGCTTCCTATGAGTTTACTACCTTAACTTGCATTCCTGGTGTGATCACGTATCGTGGAGCTAAAATTCAGTTGCTGGATCTCCCTGGAATTATTGAAGGTGCTAAAGATGGAAAGGGAAGAGGAAGGCAGGTTATCAGTACTGCAAGGACATGCAATTGCATTTTAATTGTTCTTGATGCCATAAAACCGATAACTCATAAGCGACTTATAGAAAAAGAGCTAGAGGGATTTGGTATAAGGTTAAACAAGGAGCCACCAAATCTAACTTTTAGGAAGAAAGATAAAGGTGGGATCAACCTTACCTCAACTGTCAACAGCACACATTTGGATCTTGACACTGTGAAGGCTATATGTAGTGAGTACAGAATTCACAATGCGGATATTACTCTCAGGTATGATGCTACTGCTGATGACCTTATAGATGTCATCGAGGGCAGTAGAGTATATATGCCTTGCATCTATGTTGTGAACAAGATTGATCAGATCACACTTGAGGAACTGGAGATCTTGGATAAGCTACCTCATTACTGCCCAATCAGTGCGCACCTGGAGTGGAACCTTGATGGTCTTCTGGAGAAAATTTGGGAATATCTCGATTTAACTCGTATTTATACTAAACCTAAAGGGATGAATCCTGACTATGAAGACCCTGTAATATTGTCATCTAAGAAGAGGACAGTTGAGGACTTCTGCGATCGCATTCACAAGGATATGCTTAAACAGTTTAAGTATGCGCTGGTCTGGGGTTCAAGTGCGAAACACAAGCCTCAAAGGGTTGGCAAGGAGCATGAACTTGAAGATGAAGACGTTGTTCAGATTATCAAGAAAGTATAA 1107 0.4182 MATVMQKIKDIEDEMARTQKNKATAHHLGLLKAKLAKLRRELLTPTSKGGGGAGEGFDVTKSGDSRVGLVGFPSVGKSTLLNKLTGTFSEVASYEFTTLTCIPGVITYRGAKIQLLDLPGIIEGAKDGKGRGRQVISTARTCNCILIVLDAIKPITHKRLIEKELEGFGIRLNKEPPNLTFRKKDKGGINLTSTVNSTHLDLDTVKAICSEYRIHNADITLRYDATADDLIDVIEGSRVYMPCIYVVNKIDQITLEELEILDKLPHYCPISAHLEWNLDGLLEKIWEYLDLTRIYTKPKGMNPDYEDPVILSSKKRTVEDFCDRIHKDMLKQFKYALVWGSSAKHKPQRVGKEHELEDEDVVQIIKKV* 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1749 368 CDD DRG 65 297 IPR045001 GO:0003924|GO:0005525
Dod09g1749 368 ProSitePatterns GTP1/OBG family signature. 117 130 IPR006074 GO:0005525
Dod09g1749 368 ProSiteProfiles TGS domain profile. 290 366 IPR004095 -
Dod09g1749 368 Gene3D - 283 368 IPR012675 -
Dod09g1749 368 PANTHER - 1 367 IPR045001 GO:0003924|GO:0005525
Dod09g1749 368 Coils Coil 1 21 - -
Dod09g1749 368 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 305 IPR027417 -
Dod09g1749 368 CDD TGS_DRG1 288 367 - -
Dod09g1749 368 Pfam C-terminal region of MMR_HSR1 domain 186 291 IPR031662 -
Dod09g1749 368 ProSiteProfiles OBG-type guanine nucleotide-binding (G) domain profile. 65 290 IPR031167 GO:0005525
Dod09g1749 368 TIGRFAM small_GTP: small GTP-binding protein domain 64 216 IPR005225 GO:0005525
Dod09g1749 368 Gene3D - 1 86 - -
Dod09g1749 368 Gene3D - 129 239 - -
Dod09g1749 368 Pfam TGS domain 293 366 IPR004095 -
Dod09g1749 368 PRINTS GTP1/OBG GTP-binding protein family signature 67 87 IPR006073 GO:0005525
Dod09g1749 368 PRINTS GTP1/OBG GTP-binding protein family signature 132 150 IPR006073 GO:0005525
Dod09g1749 368 PRINTS GTP1/OBG GTP-binding protein family signature 88 106 IPR006073 GO:0005525
Dod09g1749 368 PRINTS GTP1/OBG GTP-binding protein family signature 115 130 IPR006073 GO:0005525
Dod09g1749 368 SUPERFAMILY TGS-like 286 366 IPR012676 -
Dod09g1749 368 Pfam 50S ribosome-binding GTPase 66 158 IPR006073 GO:0005525
Dod09g1749 368 PANTHER DEVELOPMENTALLY-REGULATED GTP-BINDING PROTEIN 1 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1749 Dod-Chr9 39167297 39173639 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1749 K06944 - gmx:100796064 702.59