Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1746 ATGTCGGCCTCTTCCTCCTGCTCCGCCGTGTCAGAAGCAGAACTTACAGAACCCGCGACGACAGTTACACCCAACAACCTCATCCCGTCCCTCCCGGATGACGTGGCACTCAACTGCCTCGCACGCATCCCACGCTTCCACCACCCGGTCCTCTCCCTGGTCTCGAAGCCCATCCGCTCCCTCCTCTCGTCCCCTCTCTTCTTCAGCGCCCGCGCGCTCACCCACTCGACCCAGCACCTCCTCTACCTCACGCTCCACTCACGCGCCTCCCCGCTCCCACTGTGGTTCACGCTCCACCGCACCCCCACCCGCTCCCTCCTCGCGCCCCTCCCCTCCCTGCCCTACCCCGCCCTCGGCTCCGCGTACGCCGTCCTTGGCCCCACCATCTACGTCATCGGCGGCTCCCTCAACGACGTCCCCTCCCCCCAAGTCTGGCTCCTCGACTGCCGCTTCCACCGCTGGCTCCCGGGGCCCTCCATGCGCGTCGGCAGGGAGTTCGCCGCTGCCGGCGTCGTCGACGGCAAGATTTACGTCATCGGCGGCTGCGTCCCCGACAACTGGGCCAGGTCCGCCAACTGGGCGGAGGTTCTGGACCCCGCCGTCGGCCGATGGGAGCGGGTGGCGAGCCCGGCGGAGGTCCGGGAGAAGTGGATGCACTCCAGCGCCGTCGTGGAGGACAAGGTTTACGCCATGGCGGACCGGGGCGGCATCGCGTACGATCCACGGAGGGGCGCGTGGGAGGGCGTGGGGACGGAGCTGGACCTAGGGTGGAGGGGGAGGGCCTGTGTGATGGATGGGATTCTGTATTGTTACGATTACTTGGGGAATATTCAGGGTTTTGATGTGAGGAGTGGCGTTTGGAAGGAATTGAAGGGGTTGGATAAGGGTTTGCCGAGGTTTCTGTGTGGGGCTACTATGGCTGATGTGGGTGGGAAGCTGGTTGTGGTTTGGGAGTGTGATGGGAGTGGGAAGGAGATGATGGAGATTTGGTGTGCTGAGATTGAGGTCAGCAAGAAGAATGGGGATGGTGAGGAATTGTGGGGTGATGTTGTTTGGTTTGATAAGGTTCTCTCTGCACCCAAAGGGTCCTCCATTGTGCAGTGTTCTGCAATTGCCGTGTGA 1122 0.6319 MSASSSCSAVSEAELTEPATTVTPNNLIPSLPDDVALNCLARIPRFHHPVLSLVSKPIRSLLSSPLFFSARALTHSTQHLLYLTLHSRASPLPLWFTLHRTPTRSLLAPLPSLPYPALGSAYAVLGPTIYVIGGSLNDVPSPQVWLLDCRFHRWLPGPSMRVGREFAAAGVVDGKIYVIGGCVPDNWARSANWAEVLDPAVGRWERVASPAEVREKWMHSSAVVEDKVYAMADRGGIAYDPRRGAWEGVGTELDLGWRGRACVMDGILYCYDYLGNIQGFDVRSGVWKELKGLDKGLPRFLCGATMADVGGKLVVVWECDGSGKEMMEIWCAEIEVSKKNGDGEELWGDVVWFDKVLSAPKGSSIVQCSAIAV* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1746 373 Gene3D - 71 340 IPR015915 GO:0005515
Dod09g1746 373 SUPERFAMILY F-box domain 24 100 IPR036047 GO:0005515
Dod09g1746 373 Pfam Kelch motif 119 161 IPR006652 GO:0005515
Dod09g1746 373 Pfam Kelch motif 166 209 IPR006652 GO:0005515
Dod09g1746 373 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP4 20 357 - -
Dod09g1746 373 SMART kelc_smart 175 227 IPR006652 GO:0005515
Dod09g1746 373 SMART kelc_smart 128 174 IPR006652 GO:0005515
Dod09g1746 373 SUPERFAMILY Kelch motif 80 355 IPR015915 GO:0005515
Dod09g1746 373 PANTHER F-BOX/KELCH-REPEAT PROTEIN SKIP6 20 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1746 Dod-Chr9 39134305 39137172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1746 31 357 Miscellaneous Gene Families AT4G33900 35.955 1.86e-57 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1746 - - gmx:100795539 539.265