Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1727 ATGGCTGCGCGAGCCCTATTGACCCGAAAAACCCTAGCCACTGTGCTCCGCAATGACCCCAAACCCATGACACTGGGCATAGCAGCGGTAGCATCATCAACGCATTCCCGTGGGCTGCATACCTTTACGCTGCCGGATCTCGCCTACGACTACGGGGCACTGGAGCCCGCAATCAGCGGCGAAATCATGCAGCTGCACCACCAGAAGCACCACCAGGCTTACGTCACCAACTACAACAAGGCTCTCGAGCAGCTTCACGATGCCCTCCCTAAGGGCGATTCCCCTACCATCGTCAAGCTCCAGAGTGCCATCAAGTTCAATGGCGGAGGTCATATCAACCATTCTATTTTCTGGAAAAACCTGGCTCCTGTTCGTGAAGGAGGTGGTGAACCACCCAAGGGTTCCCTGGGATGGGCCATTGACACGCATTTTGGTTCTCTCGAAGCATTGGTACAAAAGATTAATGCAGAAGGTGCTGCCCTACAGGGTTCTGGATGGGTGTGGCTTGGTCTGGACAAAGAGTTGAAAAGGCTTGTAGTTGAAACCACTGCTAATCAGGACCCGCTGGTTACTAAGGGACCAAGTTTGGTTCCATTGCTTGGTGTAGATGTTTGGGAGCATGCTTACTACTTACAGTACAAGAATGTAAGACCAGACTATTTGAAGAACATTTGGAAAGTGATTGACTGGAAATATGCCAGTGAACTGTATGAAAAAGAGAGCTCTTAA 729 0.5062 MAARALLTRKTLATVLRNDPKPMTLGIAAVASSTHSRGLHTFTLPDLAYDYGALEPAISGEIMQLHHQKHHQAYVTNYNKALEQLHDALPKGDSPTIVKLQSAIKFNGGGHINHSIFWKNLAPVREGGGEPPKGSLGWAIDTHFGSLEALVQKINAEGAALQGSGWVWLGLDKELKRLVVETTANQDPLVTKGPSLVPLLGVDVWEHAYYLQYKNVRPDYLKNIWKVIDWKYASELYEKESS* 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1727 242 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), N-terminal domain 39 123 IPR036324 -
Dod09g1727 242 Gene3D Fe,Mn superoxide dismutase (SOD) domain 59 122 IPR036324 -
Dod09g1727 242 Gene3D - 123 242 IPR036314 -
Dod09g1727 242 PRINTS Manganese superoxide dismutase signature 105 118 IPR001189 GO:0004784|GO:0006801|GO:0046872
Dod09g1727 242 PRINTS Manganese superoxide dismutase signature 161 169 IPR001189 GO:0004784|GO:0006801|GO:0046872
Dod09g1727 242 PRINTS Manganese superoxide dismutase signature 66 79 IPR001189 GO:0004784|GO:0006801|GO:0046872
Dod09g1727 242 PRINTS Manganese superoxide dismutase signature 45 56 IPR001189 GO:0004784|GO:0006801|GO:0046872
Dod09g1727 242 PRINTS Manganese superoxide dismutase signature 201 213 IPR001189 GO:0004784|GO:0006801|GO:0046872
Dod09g1727 242 PANTHER SUPEROXIDE DISMUTASE 33 241 - -
Dod09g1727 242 Pfam Iron/manganese superoxide dismutases, C-terminal domain 132 234 IPR019832 GO:0004784|GO:0006801|GO:0046872
Dod09g1727 242 ProSitePatterns Manganese and iron superoxide dismutases signature. 203 210 IPR019833 GO:0004784|GO:0006801|GO:0046872
Dod09g1727 242 SUPERFAMILY Fe,Mn superoxide dismutase (SOD), C-terminal domain 127 239 IPR036314 -
Dod09g1727 242 PANTHER SUPEROXIDE DISMUTASE 2 33 241 - -
Dod09g1727 242 PIRSF MnSOD_FeSOD 14 242 IPR001189 GO:0004784|GO:0006801|GO:0046872
Dod09g1727 242 Pfam Iron/manganese superoxide dismutases, alpha-hairpin domain 41 122 IPR019831 GO:0004784|GO:0006801|GO:0046872
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1727 K04564 - gmx:100785490 438.728