Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1725 ATGGTATATGCAGCTACTATGGAGGATAGACAAGATAACCAACAACTGCTCTCAATTGATGAGGAACTTTGGCTGTTCGCCGAAGAACGGGCCCTAGAGATACTATGTACGATTCAACCAAATGTAATTTCTGAGGTGCACAGGAAGGAGGTTATTGAATATGTTCAGGGGCTGATTAGAGGCTACTATGGAGCAGAGGTCTTCCCATTTGGCTCAGTCCCACTAAAAACCTATCTTCCTGATGGAGATATTGACTTTACAGCTCTCAGCCATGAAAATGCCGAGGCGGATTTGGCAAAAACAGTATGCAGTTTACTTGAAAGCAATGATGACTCTGAATTCCAAGTAAAAGACGTACAACATATTCGTGCACAGGTCCAGGTTGTGAAATGCACAGTGAAAAATATAGCAGTTGACATCTCTTTCAATCAGATGGCTGGACTCTATGCTCTGCGCTTTCTGGAGCAGGTTGACCAACTTCTTGGGAAAAACCATCTTTTCAAGCGCAGTATTATCCTAATCAAAGCTTGGTGCTACTATGAGAGCCGAATTCTCGGTGCACACCATGGCCTGTTCTCAACATATGCAGTGGAAGCATTAGTTTTGTACATTATCAATCGATATCATTCATCAGTGCGTGGTCCTCTAGAGGTGCTGTACAGATTTTTGGACTACTACAGCACATTTGATTGGGAAATTAATTATCTCAGTGTAGATGGCCCGAAACCCTTATCTTCCCTTCCAGAAATAGTTGAGACACCAGAATGTGAGCGGGGTGATTTTTTGCTCGGTAAAGAGTTTCTGAGAAATTACAGGGATATGTGCTCTATTTCAGTAAGGGCATGTGAGACTACAAAGCATGAATTTCCCACCAAGCACTTGAACATTATGGATCCTCTAAGAAATGACAACAACCTGGGCCGTAGTGTCAACAAAGCCAATTTACATCGAATTCGGTTTGCTCTTTCCTTCGGTGCCCGAAAGCTTAAGGAGATCCTTACACTTCCAGGAGAAAGGATGGGTGCAGCACTTGAGAAGTTTTTCATGAGCACTTTGGACAGGAATGGGAAAGGACAAAGGCCAGATATTGAAGTTCCCATTCCTGCATTTGGTACTGGAAAATCTGAAGAGTGTGTCCTCCATGGAGATTGTGAAAGTTACTATGGTGCCCTACAATTTGTTCAGATGTATGGTAACTATGGCATGCCGCTCACTGCACTTCCCAGTTCTCCATCATCAGCTGCTCGGGCTGACATCCATGCAGTATCAACACAGCAGAACTGGAGTATGTTTTATCAAGGGGGTACCAGTGTATATGTACCTATACAGGCCGATGTATATGTCCCAACACAGTCTGATGTATGTGTTGCAACACAGTCTGATGTTTATGCCCCTGCACAGACTGATGTAGATGTCTCTGCTCAGACTGATATATTTGTCCCGGCACAGACATTCCATCATCCAAATGCTTCACAAGCAACTTACAGCCTTGATGAAATGGGTAAATCACGAGGAACGGGCACATACATACCTGATGTGACTCATAATTCGTATTGGAATATGCGTGTAAAGGTGAACAAGCCTAGGAGATATACTCCTGTTGTGAATCATAATGTACTGCCCAAATCACCTCCGAGAAAGCAACTAGCTGAGGTTCATTTTGATGAGACAGCAGATGAGAATGGTAACTCAAGGTCGTTTGAGCTTGCAAATGAAGAATTCCCACTTCTTTCGGGCATTCCCAAATCAACTCCGAGAAAGCAACTAGCTGAGGTTCATTCCAATGAGACAGCAGACGAGAATGGTAATCCAATGTCGTTTGAGCATGCAAATGAAGAATTCCAACTTCTTTCCAGCATTCCCAAATCACCTCTGAGAAAGCAACTAGCTGAGGTTCATTCTGGTGGGACAACAGATGAGATTGGTAACTCAGGGTCGTTTGAGCTTGCAATTGAAGAATTCCCACTTCTTTCAAGCATTCGCCAGAACAGCACATCAGAAGCCCGAGAGTCCATTCTAGAAACTGATATCTCTGAGCAGGCCAGGAATTCCTCTTCATCCCAGCTCAATATTAAGTTTGGAAGTTTCAGGAATCCAGAATTACTTACAGAACTAAGTTTGCCACCAAAGGATGAGAAAGAAGATTCTGGTGTTTTATCATCTAATGGCACCATGCTTGGTTGTTTCAAGGGTGGCAATGGAGAGTAA 2208 0.4339 MVYAATMEDRQDNQQLLSIDEELWLFAEERALEILCTIQPNVISEVHRKEVIEYVQGLIRGYYGAEVFPFGSVPLKTYLPDGDIDFTALSHENAEADLAKTVCSLLESNDDSEFQVKDVQHIRAQVQVVKCTVKNIAVDISFNQMAGLYALRFLEQVDQLLGKNHLFKRSIILIKAWCYYESRILGAHHGLFSTYAVEALVLYIINRYHSSVRGPLEVLYRFLDYYSTFDWEINYLSVDGPKPLSSLPEIVETPECERGDFLLGKEFLRNYRDMCSISVRACETTKHEFPTKHLNIMDPLRNDNNLGRSVNKANLHRIRFALSFGARKLKEILTLPGERMGAALEKFFMSTLDRNGKGQRPDIEVPIPAFGTGKSEECVLHGDCESYYGALQFVQMYGNYGMPLTALPSSPSSAARADIHAVSTQQNWSMFYQGGTSVYVPIQADVYVPTQSDVCVATQSDVYAPAQTDVDVSAQTDIFVPAQTFHHPNASQATYSLDEMGKSRGTGTYIPDVTHNSYWNMRVKVNKPRRYTPVVNHNVLPKSPPRKQLAEVHFDETADENGNSRSFELANEEFPLLSGIPKSTPRKQLAEVHSNETADENGNPMSFEHANEEFQLLSSIPKSPLRKQLAEVHSGGTTDEIGNSGSFELAIEEFPLLSSIRQNSTSEARESILETDISEQARNSSSSQLNIKFGSFRNPELLTELSLPPKDEKEDSGVLSSNGTMLGCFKGGNGE* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1725 735 SUPERFAMILY Nucleotidyltransferase 10 185 IPR043519 -
Dod09g1725 735 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 474 618 - -
Dod09g1725 735 MobiDBLite consensus disorder prediction 704 735 - -
Dod09g1725 735 Gene3D - 208 334 - -
Dod09g1725 735 MobiDBLite consensus disorder prediction 577 603 - -
Dod09g1725 735 Gene3D Beta Polymerase, domain 2 27 168 IPR043519 -
Dod09g1725 735 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 623 723 - -
Dod09g1725 735 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 14 451 - -
Dod09g1725 735 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 474 618 - -
Dod09g1725 735 MobiDBLite consensus disorder prediction 588 603 - -
Dod09g1725 735 SUPERFAMILY PAP/OAS1 substrate-binding domain 166 334 - -
Dod09g1725 735 CDD NT_PAP_TUTase 47 154 - -
Dod09g1725 735 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 14 451 - -
Dod09g1725 735 PANTHER NUCLEOTIDYLTRANSFERASE DOMAIN PROTEIN 623 723 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1725 Dod-Chr9 38937646 38944929 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1725 - - aip:107623369 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g0936 08 11468050 11479178 Dod09g1725 09 38937646 38944929 ECH
Dod09g1725 09 38937646 38944929 Dod09g1725 09 38937646 38944929 ECH