Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1722 ATGGCGAAGCAGAAGCAAAGAAACACTTTTTTGGCGATTCTCCTCCTCTTCCTCTGTCTCTGTGCTTCCTCCTCTGTTTTGGTTTCAGCGAGAGTTGTGCCTCTCTTGCAGAGTTTCGAGAAACCCATTTTCAGATCAAACTTCCACTCCGTTTACGACACTTCTAAGTATGGTGTCTTTCAACTTAGTAATGGCTTGGCTCAGACGCCTCAGATGGGATGGAATAGCTGGAACTTCTTTGCCTGCAATATCAATGAAACGGTCATCAAGGAAACTGCTGATGCCCTGGTATCAACGGGGTTGGCAGATTTAGGTTATGTGTATGTCAACATAGATGATTGCTGGTCTTCTGTATTTCGGGATTTAAAGGGTCAACTGGTACCTAATGATAAGACATTTCCATCAGGAATCAAAGCTCTTGCAGATTATGTACATGGAAAGGGACTCAAGCTTGGTATATATTCTGATGCTGGGCTTTTTACATGTCAAGCCCGACCAGGATCGCTTTTTCATGAAACTGATGATGCAGCTTTGTTTGCCTCTTGGGGTGTAGATTATTTGAAGTATGACAATTGTGTTAATTTGGGCATCCCACCCAAGAAAAGATATCCACCAATGCGTGATGCTCTTAATGCAACTGGACGTACAATTTTCTATTCACTCTGTGAATGGGGTGAGGATGACCCTGCCATATGGGCAGGTACTGTTGGTAACAGTTGGCGCACAACTGAGGACATCAATGATACTTGGGCAAGCATGACAACCATTGCTGATCTTAATGACAAGTGGGCTGCATATGCTGGTCCTGGAGGATGGAATGACCCAGATATGTTGGAAGTTGGCAATGGTGGCATGACTTATGAGGAATACCGTGCTCACTTCAGCATCTGGGCTTTAATGAAGGCTCCTCTATTGATTGGTTGCGATGTAAGAAATTTGACTGCTGAGACATATGAGATTTTGAGCAATAAAGAAGTCATTGCCATAAATCAAGACCCACTTGGTGTCCAAGGCAGGAAGATTCACGTTTCTGGAAAAGATAATTGTAGTCAGGTTTGGGCTGGTCCTTTATCTGGACATCGGTTGGTTGTTGCTCTCTGGAATAGGTGCTCAAATGCTACTACTATAACAGCTTCATGGGATGCACTCGGGCTTGAATCTGGAATTTATGTTTCTGTAAGGGATTTGTGGCAGCACAAGGTACTAACATCAGATGCGGTGTCATCATTCAGTGCTGGAGTTGAGGCTCACGATTGTCATCTGTACATTTTCACTCCTTCCACAGTATCTCACTCTGTAGAGTAG 1305 0.4391 MAKQKQRNTFLAILLLFLCLCASSSVLVSARVVPLLQSFEKPIFRSNFHSVYDTSKYGVFQLSNGLAQTPQMGWNSWNFFACNINETVIKETADALVSTGLADLGYVYVNIDDCWSSVFRDLKGQLVPNDKTFPSGIKALADYVHGKGLKLGIYSDAGLFTCQARPGSLFHETDDAALFASWGVDYLKYDNCVNLGIPPKKRYPPMRDALNATGRTIFYSLCEWGEDDPAIWAGTVGNSWRTTEDINDTWASMTTIADLNDKWAAYAGPGGWNDPDMLEVGNGGMTYEEYRAHFSIWALMKAPLLIGCDVRNLTAETYEILSNKEVIAINQDPLGVQGRKIHVSGKDNCSQVWAGPLSGHRLVVALWNRCSNATTITASWDALGLESGIYVSVRDLWQHKVLTSDAVSSFSAGVEAHDCHLYIFTPSTVSHSVE* 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1722 434 PANTHER ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE 46 425 IPR002241 GO:0004553|GO:0005975
Dod09g1722 434 SUPERFAMILY Glycosyl hydrolase domain 327 425 - -
Dod09g1722 434 Pfam Alpha galactosidase A 69 332 IPR002241 GO:0004553|GO:0005975
Dod09g1722 434 Gene3D - 335 427 IPR013780 -
Dod09g1722 434 SUPERFAMILY (Trans)glycosidases 62 333 IPR017853 -
Dod09g1722 434 CDD GH27 70 332 IPR002241 GO:0004553|GO:0005975
Dod09g1722 434 Pfam Alpha galactosidase C-terminal beta sandwich domain 348 423 IPR041233 -
Dod09g1722 434 ProSitePatterns Alpha-galactosidase signature. 105 121 IPR000111 GO:0004553|GO:0005975
Dod09g1722 434 PRINTS Glycosyl hydrolase family 27 signature 267 286 IPR002241 GO:0004553|GO:0005975
Dod09g1722 434 PRINTS Glycosyl hydrolase family 27 signature 100 115 IPR002241 GO:0004553|GO:0005975
Dod09g1722 434 PRINTS Glycosyl hydrolase family 27 signature 202 220 IPR002241 GO:0004553|GO:0005975
Dod09g1722 434 PRINTS Glycosyl hydrolase family 27 signature 141 162 IPR002241 GO:0004553|GO:0005975
Dod09g1722 434 PRINTS Glycosyl hydrolase family 27 signature 175 192 IPR002241 GO:0004553|GO:0005975
Dod09g1722 434 PRINTS Glycosyl hydrolase family 27 signature 64 83 IPR002241 GO:0004553|GO:0005975
Dod09g1722 434 PRINTS Glycosyl hydrolase family 27 signature 288 309 IPR002241 GO:0004553|GO:0005975
Dod09g1722 434 Gene3D Aldolase class I 62 334 IPR013785 -
Dod09g1722 434 PANTHER ALPHA-GALACTOSIDASE 3 46 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1722 Dod-Chr9 38921295 38929481 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1722 1 432 Glycoside Hydrolase AT3G56310 71.659 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1722 K07407 - gmx:100784072 752.281