Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1541 ATGGGTTGTCGTGAAGGACGAGCCACGATGACGAGAAGCTTCACTCCAAACGGCCTCTTGCCTAATAAAGCAGACTCCATTCCAAAAGTTCTTGACCATGACAGATGGTCACGAGCTGAAGAGAGAACTGCAGAGCTGCTTAAGTATGTTCAGCCAACCTTCAAATCAGAACAACGCCGTGATGGTGTTGTTTCTTACCTACAACGCCTCATCACAAGCTCTGTCTCTTGTAAGGTGTTTCCACTTGGGTCTGTACCATTAAAGACTTATTTACCTGATGGAGATATTGACCTAACAGCACTCGGTGGCAATCAACAATTGAACAACAATTTTTTCAATGAGGTGCGGAGAATCTTAGAAAGTGAATTGAAGAGGAGTGATGATGCTGAAATCCGTGTGAAAGAGGTTCAGTTCATACAGGCCGAGGTGAAGATCCTAAAGTGCCTGGTGGAAAATTTTGTAGTTGACATATCTTTAAATCAGCTTGGTGGTCTATGTACGCTTTGTTTTCTTGAGGAGGTTGACAATCTGATAGGACGGAATCATTTATTCAAACGCAGTGTTATATTGGTAAAAGCTTGGTGTTACTATGAGAGCCGCATCCTAGGAGCTCAGCATGGACTTATGTCCACCTATGCAGTGGAAACTTTAGTCATGTACATATTTCATGTTTACAATGGCATATTTGCTGGACCACTTGAGGTACTTTATAGATTTCTTGAATTCTTTAGCAAATTTGACTGGAGTAACTATTGCATTAGCTTGTGGGGACCAGTGCCCATAAGATCACTTCCTAATATGAGAGCGGATCGTCCAAGAAAGGATTGGAAAGAGTTGCTGCTCAGTGAAACGTTTCTTAATGCTTGTATGTGCTGTTATGGTGCTATGACAAGTAAACAAGAAACTCAAGGGCAACCATTTGTTTCCAAATACCTCAATATTGTAGATCCTCTAAGGGCAAACAACAACTTGGGGCGTAGCATTAGTAAGGGTAACTTCTTTAGGATAAGAAGTGCAATTAATCATGGTGCACAGCGGCTAGTGAGATTGCTGGACTGCCCAGAGGAGAAGCTGATAGCCGAATTCGATTTCTTTTTCAAAAACACATGGGATAGAAATGGGAACGGCTACTGGATACCCTTTAATCAGCTTAATGCTATTAATAATGGTGTTAAAAATTCAGCACATCATGAACGTGGGGATCGGCAGCCTCAAGCTTCTGATAGGTCTCATGAGGTGTACCAAAGGCCTGCAACCAATTTGAATGAATCAGAACAAAAGTTTGGAACCTCTGGTGTATCAGCTGTTTCTGACGCTGGGAGCTCAAAGACTAACAGCATCACCTCTAGTACCTTGACCTCTGATATGATGCATGCAAATCCCATGAAGAATGCAGTTATTGATCAAGGTCAGAGTTCTGAACACTCATCAAATGAAGTTCGTGCCATGCCTCACTTTGCAAGGATACACTCTGTTCCAGAGTTTACGCCTGTTTCAACTCAGCGTAGGCGTACACGGGTTTCACGAAGACAAAGTGGACAGATCCGTTCTGCTTCTTCAATGGCTGATAATAGCAGGGGATCAAGTTCAAGACATGAAGTTTTAGACAACCAAAATATCAGAGTTTTACCTGAAAATCAGCAATCTTTTGGCCAGAGAAGTAAAGGTGCAGTTGACTTAAATGATGCTTCAAATAGTTGCTATGGTGAGTTCGGGATGGGTGTCAATGACCGAAATGGCTACTTAGTTGATGAGGCAATGCAGATGCATAAGGAAGAGTATGCTATAATGAATACTAGGGAAACTTGCAGGAATCCCAGTTTCAATGGATATCTGCAAGCGCAGGTGAATGTGAATACAAGTAATGCCCCTTATTTTGACTCCTTTTGGGGACAGAATATGCCTTATTCTCAGGATTCAGTCCCATTTCCTGCGATGGAATGGTTCCCAGGTGTAGCAATGACATCAAATGGCGAAGAATTTATTGAACCATATGATTATAGTATGCAAGTAGCTCATTTAGATTATGACAACAGTGATGCAGTTTCCTGGCTTGAGCAAGACATGAATAATATGAGGTTATATAATGGTGAAGATGGAAATGTTCAACCTCAACAAGAGAGTAATAGGCAAATGCCTGGTAAAGGTGCTTCCACCGTAGGCAGTAACTTGGCTGACACTTCTAACCTTGCTGGTCCTCCCAGTGAGAACCATGGCATTTTCCCATGCGAATTTGGTCCCAATGAACGACCATTTCCATTCCCTATCATGTTCCCATTCTCCAATCTTCCTACTGAGAGCTTTGATGTTTTGGATGGTGATTTTGCTACCCATTGGATGAACATGAATCATGGAATGATTTGTCTGCATGGACAGTCACAGGGGCCTTTACTCCCTACTCCCTCTTTTGTACCTCCAATGCATTTACAATTACTGGAACAGCTTCCTTGGCATGTTCCTTGTACACCACTACCTTCAGCTAACCTGAACATCAAGGCTCATTGTTTTCCCCCAGATCCTATGATGCCAATTGTACCTGTTTCTGGCCCCCATGTGGGAGTTAATCAACCTGGTGCTGGTGAGCTTCCCAGACAAAGAGCTGGGATTGGAACTTACATGCCAGATCCAGAAAGTTATAAGGTACACAGGAAGCATCAGAACAAGGAGAAGGTTCACATATTGCTTCCGATGAGCTGGCAAAGCTGGAAAGAGATTGTGCAGATTCTTCACCCCAGCCCTTATCGCCCAATATCAGTCGGTGAATTTCTTGTTTGA 2775 0.4277 MGCREGRATMTRSFTPNGLLPNKADSIPKVLDHDRWSRAEERTAELLKYVQPTFKSEQRRDGVVSYLQRLITSSVSCKVFPLGSVPLKTYLPDGDIDLTALGGNQQLNNNFFNEVRRILESELKRSDDAEIRVKEVQFIQAEVKILKCLVENFVVDISLNQLGGLCTLCFLEEVDNLIGRNHLFKRSVILVKAWCYYESRILGAQHGLMSTYAVETLVMYIFHVYNGIFAGPLEVLYRFLEFFSKFDWSNYCISLWGPVPIRSLPNMRADRPRKDWKELLLSETFLNACMCCYGAMTSKQETQGQPFVSKYLNIVDPLRANNNLGRSISKGNFFRIRSAINHGAQRLVRLLDCPEEKLIAEFDFFFKNTWDRNGNGYWIPFNQLNAINNGVKNSAHHERGDRQPQASDRSHEVYQRPATNLNESEQKFGTSGVSAVSDAGSSKTNSITSSTLTSDMMHANPMKNAVIDQGQSSEHSSNEVRAMPHFARIHSVPEFTPVSTQRRRTRVSRRQSGQIRSASSMADNSRGSSSRHEVLDNQNIRVLPENQQSFGQRSKGAVDLNDASNSCYGEFGMGVNDRNGYLVDEAMQMHKEEYAIMNTRETCRNPSFNGYLQAQVNVNTSNAPYFDSFWGQNMPYSQDSVPFPAMEWFPGVAMTSNGEEFIEPYDYSMQVAHLDYDNSDAVSWLEQDMNNMRLYNGEDGNVQPQQESNRQMPGKGASTVGSNLADTSNLAGPPSENHGIFPCEFGPNERPFPFPIMFPFSNLPTESFDVLDGDFATHWMNMNHGMICLHGQSQGPLLPTPSFVPPMHLQLLEQLPWHVPCTPLPSANLNIKAHCFPPDPMMPIVPVSGPHVGVNQPGAGELPRQRAGIGTYMPDPESYKVHRKHQNKEKVHILLPMSWQSWKEIVQILHPSPYRPISVGEFLV* 925
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1541 924 MobiDBLite consensus disorder prediction 696 737 - -
Dod09g1541 924 MobiDBLite consensus disorder prediction 1 20 - -
Dod09g1541 924 Gene3D - 231 357 - -
Dod09g1541 924 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 8 732 - -
Dod09g1541 924 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 767 886 - -
Dod09g1541 924 MobiDBLite consensus disorder prediction 410 449 - -
Dod09g1541 924 MobiDBLite consensus disorder prediction 696 734 - -
Dod09g1541 924 PANTHER NUCLEOTIDYLTRANSFERASE 8 732 - -
Dod09g1541 924 PANTHER NUCLEOTIDYLTRANSFERASE 767 886 - -
Dod09g1541 924 SUPERFAMILY PAP/OAS1 substrate-binding domain 183 353 - -
Dod09g1541 924 MobiDBLite consensus disorder prediction 493 539 - -
Dod09g1541 924 MobiDBLite consensus disorder prediction 394 409 - -
Dod09g1541 924 CDD NT_PAP_TUTase 59 167 - -
Dod09g1541 924 MobiDBLite consensus disorder prediction 393 449 - -
Dod09g1541 924 Gene3D Beta Polymerase, domain 2 36 176 IPR043519 -
Dod09g1541 924 MobiDBLite consensus disorder prediction 511 539 - -
Dod09g1541 924 SUPERFAMILY Nucleotidyltransferase 26 202 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1541 Dod-Chr9 37102220 37110464 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1541 - - cam:101495144 674.855