Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1502 ATGGGAAGGTATTGTTTGGTTGGGGTGTTGATTGTGGTGGGGTGTGCCTGCTTGTTGGGCAGTGTTGGCGTTGAAGGGTACCCAGATGAGGACCTGGTGGTGACACTACCTGGACAACCAAAGGTTGGGTTCAGGCAGTATGCTGGTTATGTTGACATTGATGTGAACCATGGGAGGAGCCTCTTCTACTACTTTGTGGAGGCTCAACATGACCCTCACAACAAGCCCCTCACCCTTTGGCTCAATGGAGGCCCGGGATGCTCCTCTATTGGAGGAGGTGCCTTCACTGAATTGGGACCCTTTTATCCTGAAGGTGATGGACGTGGTCTCCGAAGAAACTCAATGTCTTGGAATAAAGCATCCAACCTCCTCTTTGTGGAGTCTCCTGCAGGAGTTGGATGGTCATACTCAAATGCTACTTCAGATTATAACACTGGAGATGCATCCACTGCCAGTGATATGCATATGTTCTTGCTGAAATGGTACGAGAAGTTTCCGTCCTACAGATCAAGGGAACTGTTCCTTACTGGAGAAAGCTATGCAGGACATTACATCCCACAGTTAGCGAATGCTCTACTGGACCACAATGCTCATTCAACTGGTTTCAAATTCAATATTAAAGGAGTTGCTATTGGAAACCCACTTCTGAAACTTAATCGTGATTCACCAGCAATATATGAATACTTCTGGTCACATGGGATGATATCCGATGAAATGGGCCTTGCCATTATGAACGATTGTGATTTTGATGATTATGTCTCTTCAAGCTCTCATAATGTATCTAAATCATGCAACGATGCCATGGCTGAAGCAAATGACATTGTTGGCGATTATATAAACAACTATGATGTGATTCTGGATGTGTGTTATCCATCCATTGTTGAACAAGAACTGAGATTGAAAAAGATGGCTACCAAAATTAGTTATGGTGTAGATGTCTGTATGACTTATGAAAGAGCTTATTACTTCAACCTACCTGAGGTTCAGAGGGCCCTTCATGCAAACCGTACCAATCTTCCTTATAGGTGGTCCATGTGCAGTGGTGTTCTAAATTATAGTGAAACTGATGTTAACGCCAATATCCTCCCAATTCTCAAAAGAATAGTTCAAAACCATATCCCTGTGTGGGTTTTCAGTGGAGACCAAGATTCTGTTGTGCCACTGCTGGGATCTCGAACACTCATTCGTGAACTAGCTCATGAGCTGAAGTTCAAGATCACTGTCCCATATGGAGCTTGGTTCCACAAAAGACAGGTTGGGGGTTGGGTAACCGAGTACGGAAATTTGTTGACTTTTGCCACAGTAAGAGGAGCTGCTCACATGGTACCTTATGCACAACCTTCAAGGGCACTGCATCTATTCACTTCATTTGTGCGTGGCAGGAGATTGCCAAACACAACACGCCCTTCAATTGATGAATAA 1422 0.443 MGRYCLVGVLIVVGCACLLGSVGVEGYPDEDLVVTLPGQPKVGFRQYAGYVDIDVNHGRSLFYYFVEAQHDPHNKPLTLWLNGGPGCSSIGGGAFTELGPFYPEGDGRGLRRNSMSWNKASNLLFVESPAGVGWSYSNATSDYNTGDASTASDMHMFLLKWYEKFPSYRSRELFLTGESYAGHYIPQLANALLDHNAHSTGFKFNIKGVAIGNPLLKLNRDSPAIYEYFWSHGMISDEMGLAIMNDCDFDDYVSSSSHNVSKSCNDAMAEANDIVGDYINNYDVILDVCYPSIVEQELRLKKMATKISYGVDVCMTYERAYYFNLPEVQRALHANRTNLPYRWSMCSGVLNYSETDVNANILPILKRIVQNHIPVWVFSGDQDSVVPLLGSRTLIRELAHELKFKITVPYGAWFHKRQVGGWVTEYGNLLTFATVRGAAHMVPYAQPSRALHLFTSFVRGRRLPNTTRPSIDE* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1502 473 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Dod09g1502 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 430 443 IPR001563 GO:0004185|GO:0006508
Dod09g1502 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 136 IPR001563 GO:0004185|GO:0006508
Dod09g1502 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 161 186 IPR001563 GO:0004185|GO:0006508
Dod09g1502 473 PRINTS Carboxypeptidase C serine protease (S10) family signature 113 125 IPR001563 GO:0004185|GO:0006508
Dod09g1502 473 Gene3D - 361 460 - -
Dod09g1502 473 PANTHER CARBOXYPEPTIDASE 6 467 - -
Dod09g1502 473 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 6 467 IPR001563 GO:0004185|GO:0006508
Dod09g1502 473 Gene3D - 314 350 - -
Dod09g1502 473 Gene3D alpha/beta hydrolase 28 290 IPR029058 -
Dod09g1502 473 ProSitePatterns Serine carboxypeptidases, serine active site. 175 182 IPR018202 GO:0004185
Dod09g1502 473 SUPERFAMILY alpha/beta-Hydrolases 25 467 IPR029058 -
Dod09g1502 473 Pfam Serine carboxypeptidase 38 460 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1502 Dod-Chr9 36669800 36674092 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1502 321 463 Calmodulin-binding Proteins AT2G22960 25.175 7.81e-11 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1502 K16297 - gmx:100815723 868.226