LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod09g1501	ATGGATATTTGGGATAGCTGGTGGGTTTTGCAACTCATGCAGATTCTGGGTTTGTTTAGTTTTTGGATTTCATTTGCAAAGTTGAGGACTTTATTCTCAAAAGCTTCTGGCTTTGGTCACAAAACTTTTAAGGGTAGCTCCAGCATCTGGATCTTTGTTTCTTTCAATAGGGTGGTCACAACTGGCTCCTTGATATCCCTTCTCTTGGTCCTTTCTTGGGCATTCTCATATGCTTTTCCCAGTTCTCAATCAGTGATTCAGAGTTATGAGATCCCCAAAACCAACACTTCTCATTCACTGAACCAGAGTTTTGAGATTCTTAACTCCAAGTTTCCAATGGGAAAATGCAATGTGTTTGAAGGAAGTTGGATCCAAGACGATAGCTACCCTTTATACGATGCTTCTCACTGTCCATTTGCAGAAAGAAGTTTTAATTGCATAGCTAATGGCCGTAGAGACAGAGGCTACACAAAATGGAGGTGGAAGCCAAAGAACTGTGACATTCCAAGGTTTGATGCACGTGCATTACTTGAGCAACTTCGTGGGAGAAGGGTTGTCTTTGTTGGTGATTCCTTGAGCAGGACTCAATGGGAGTCCTTGATATGTTTGCTAATGACAGGAGTTGAGAATAAGAAGAGTGTCTATGAAATCAAAGGCAATAGGATCACAAAACAGATTAGGTTTCTGGGTGTATTATTCAGTACTTATGATTTAAGAGTCGATTTTTATCGTTCGGTTTTCCTTGTGAGGCCTGGTCCAGTGCCTAAACATTCACCCCAAAGGGTGAAGACAGCACTGAGATTGGACAAGATGGATGATATTAGCCATGAGTGGGTTGATTCAGATGTTTTGATATTCAATTCAGGTCACTGGTGGACGCGGACGAAGCTTTTTGACATGGGTTGGTATTTTCAGGTTGGGAACTCACTGATGCTTGGAATGCCAATTAATTCTGCTTTCAACACTGCTTTGCACACCTGGGCATCTTGGGTGGAGAATTCAGTCAACACAAACAGAACAAGAGTGTACTTCCGTGCCTTTGAATCATCTCATTGGAGTGGAAAGAACCGCCATGCTTGCAAAGTGACTAGAAGGCCTTGGAAGAGAACCAATGGCAAGGACCGAAGCCTAATTTCAGATATGATCAATAAAGTTGTTAAAAATATGAGTGTTCATGTAACAGTGATGCATGTAACACCTATGGGTGCATATAGGAGCGATGGTCATGTGGGCACTTGGAATGACAACCCATCTGTGCCTGATTGTAGCCATTGGTGTCTACCTGGTGTTCCTGATATGTGGAACGAAATTCTCTTCTCATATTTGCTACCAAAAGATGTAGCAAATTAA	1350	0.4193	MDIWDSWWVLQLMQILGLFSFWISFAKLRTLFSKASGFGHKTFKGSSSIWIFVSFNRVVTTGSLISLLLVLSWAFSYAFPSSQSVIQSYEIPKTNTSHSLNQSFEILNSKFPMGKCNVFEGSWIQDDSYPLYDASHCPFAERSFNCIANGRRDRGYTKWRWKPKNCDIPRFDARALLEQLRGRRVVFVGDSLSRTQWESLICLLMTGVENKKSVYEIKGNRITKQIRFLGVLFSTYDLRVDFYRSVFLVRPGPVPKHSPQRVKTALRLDKMDDISHEWVDSDVLIFNSGHWWTRTKLFDMGWYFQVGNSLMLGMPINSAFNTALHTWASWVENSVNTNRTRVYFRAFESSHWSGKNRHACKVTRRPWKRTNGKDRSLISDMINKVVKNMSVHVTVMHVTPMGAYRSDGHVGTWNDNPSVPDCSHWCLPGVPDMWNEILFSYLLPKDVAN*	450

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod09g1501	449	Pfam	GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p	168	440	IPR026057	GO:0016740
	Dod09g1501	449	PANTHER	PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED	47	443	IPR029962	GO:0016413
	Dod09g1501	449	Pfam	PMR5 N terminal Domain	115	167	IPR025846	-
	Dod09g1501	449	PANTHER	LEAF SENESCENCE RELATED PROTEIN-LIKE	47	443	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod09g1501	Dod-Chr9	36660735	36663755	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod09g1501	-		-	gmx:100784384	761.525