Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1490 ATGGCCTTTGGGAACTGTTTAAGAGTAAGTACCACAGTATGCACAGCAAGACCTCAAACCCTTTCTCCATTCTCTCCAGGGGAAAAGCTTGTTTTGCCAACCTACAGAGGATTCAAAAAATCCATGCTAAACTCAACAGTGCCAAACCAATCTCTTTACTCAACGTGTGGTGGTACCTACAGAAAACCCCGTTTTGTTTGCAATGCTCGTGAACAGCTTGATGAAGTTCGAGTGGTGAATGACTCAAGCTGGAACAACCTCGTGATTGCAAGTGAAACCCCGGTGCTGGTTGAGTTTTGGGCACCGTGGTGTGGTCCATGCAGGATGATAGCTCCTGTTATTGATGAGTTAGCAAAAGAATATGCTGGGAAAATTGCATGCTACAAGCTTAACACCGATGACTGTCCAAACATAGCCTCACAGTACGGTATCAGAAGCATACCAACAGTTCTATTCTTCAAGAATGGAGAGAAGAAAGAAAGCGTCATTGGTGCAGTTCCCAAGTCCACTTTGTCCGCAACAGTGGATAAATATATTTGA 540 0.4426 MAFGNCLRVSTTVCTARPQTLSPFSPGEKLVLPTYRGFKKSMLNSTVPNQSLYSTCGGTYRKPRFVCNAREQLDEVRVVNDSSWNNLVIASETPVLVEFWAPWCGPCRMIAPVIDELAKEYAGKIACYKLNTDDCPNIASQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSATVDKYI* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1490 179 PRINTS Thioredoxin family signature 143 154 - -
Dod09g1490 179 PRINTS Thioredoxin family signature 95 103 - -
Dod09g1490 179 PRINTS Thioredoxin family signature 103 112 - -
Dod09g1490 179 PANTHER GEO12009P1 30 179 - -
Dod09g1490 179 TIGRFAM thioredoxin: thioredoxin 80 177 IPR005746 GO:0015035
Dod09g1490 179 Gene3D Glutaredoxin 76 179 - -
Dod09g1490 179 PANTHER THIOREDOXIN M-TYPE PROTEIN 30 179 - -
Dod09g1490 179 Pfam Thioredoxin 76 177 IPR013766 -
Dod09g1490 179 CDD TRX_family 88 176 - -
Dod09g1490 179 ProSitePatterns Thioredoxin family active site. 96 114 IPR017937 -
Dod09g1490 179 ProSiteProfiles Thioredoxin domain profile. 41 179 IPR013766 -
Dod09g1490 179 SUPERFAMILY Thioredoxin-like 64 178 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1490 Dod-Chr9 36553606 36554533 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1490 K03671 - gmx:100500292 288.885