Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1443 ATGACTAATCAATGGCCAGAAAGAACAGCAGGTTTCAGGGAAACCATGGCAGAATACCGGTCCGAGTTAAGGAAACTGGCAGAGAAGGTGATGGAAGTGATGGATGAGAATCTGGGGTTACCAATAGGATACATCAAGACGGCATTCAATGATGGAGAAGGAGACAATGCCTTCTTTGGCACCAAAGTCAGCCACTACCCTCCCTGTCCCAATCCAGAGCTAGTGAATGGCCTGAGAGCTCACACTGATGCAGGAGGTGTCATCCTACTTTTCCAAGATGACAAGGTTGGTGGCCTTCAGATGCTCAAAGATGGGCAGTGGATAGATGTCCAACCGTTGCCAAATGCCATTGTCATCAACACTGGTGATCAGATTGAGGTCCTTAGCAATGGCAAGTACAAGAGCTGCTGGCACAGGGTTCTGGTCTCTACACAAGGGAACAGGAGATCAATTGCTTCCTTCTACAACCCATCATTCAAAGCCACCATATGTCCTGCACCACAACTGGTGCAAAAAGAAAACCAAGAAGTGGAAGATGCTTATGCCTAA 549 0.4754 MTNQWPERTAGFRETMAEYRSELRKLAEKVMEVMDENLGLPIGYIKTAFNDGEGDNAFFGTKVSHYPPCPNPELVNGLRAHTDAGGVILLFQDDKVGGLQMLKDGQWIDVQPLPNAIVINTGDQIEVLSNGKYKSCWHRVLVSTQGNRRSIASFYNPSFKATICPAPQLVQKENQEVEDAYA* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1443 182 PANTHER 1-AMINOCYCLOPROPANE-1-CARBOXYLATE OXIDASE 5-LIKE 3 176 - -
Dod09g1443 182 SUPERFAMILY Clavaminate synthase-like 2 175 - -
Dod09g1443 182 Pfam 2OG-Fe(II) oxygenase superfamily 64 157 IPR044861 -
Dod09g1443 182 Gene3D - 1 182 IPR027443 -
Dod09g1443 182 Coils Coil 16 36 - -
Dod09g1443 182 PANTHER OXOGLUTARATE/IRON-DEPENDENT DIOXYGENASE 3 176 - -
Dod09g1443 182 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 57 157 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1443 Dod-Chr9 35819175 35821124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1443 13 174 Glycosyltransferase AT5G59530 37.349 4.04e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1443 K05933 - gmx:100790622 327.02