Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1441 ATGAATGGCCATAGATCTGTCGTGTCAACACTTTCAGTATGCCATGAGGTTCTTTACAGTGGTAGTTGGGATGGAACCATTCGGTTGTGGAGTCTTAATGATCACAGCCCATTGACAGTGCTGGGGGAAAGTATGCCTGGAGAGATGAAGTCTATCCTGGCTATTACTGTTGATAGACACTTGCTCGTTGCAGCACATGAGAATGGATGCATAAAGGTCTGGAGGAATGATGTCTTCATGGGTTGTAAATCATTGCATAATGGTGCCATTTTTGCTATGAGCATGCAAGGCAAATGCCTTTACACAGGTGGTAGGGACAAAAATGTTAATATACAGGAATTATCGGGAGATGAGTTTGAACTGGATGTCAGAGCATTTGGATCCATTCATTGCAGTTCAGTGGTAACGACTATTGTATGCTGCCGAGGAAAACTTTTTGTTGGATATGCTGACAAGTCTATCAAGGTTTATCATGGGAAATGGTAA 486 0.4239 MNGHRSVVSTLSVCHEVLYSGSWDGTIRLWSLNDHSPLTVLGESMPGEMKSILAITVDRHLLVAAHENGCIKVWRNDVFMGCKSLHNGAIFAMSMQGKCLYTGGRDKNVNIQELSGDEFELDVRAFGSIHCSSVVTTIVCCRGKLFVGYADKSIKVYHGKW* 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1441 161 PANTHER FINGER (CCCH TYPE) PROTEIN, PUTATIVE-RELATED 1 157 - -
Dod09g1441 161 PANTHER - 1 157 IPR044715 -
Dod09g1441 161 ProSiteProfiles Trp-Asp (WD) repeats profile. 1 40 IPR001680 GO:0005515
Dod09g1441 161 SMART WD40_4 76 113 IPR001680 GO:0005515
Dod09g1441 161 SMART WD40_4 1 31 IPR001680 GO:0005515
Dod09g1441 161 SMART WD40_4 120 158 IPR001680 GO:0005515
Dod09g1441 161 SMART WD40_4 34 75 IPR001680 GO:0005515
Dod09g1441 161 SUPERFAMILY WD40 repeat-like 3 158 IPR036322 GO:0005515
Dod09g1441 161 Pfam WD domain, G-beta repeat 3 31 IPR001680 GO:0005515
Dod09g1441 161 Gene3D - 1 160 IPR015943 GO:0005515
Dod09g1441 161 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1441 Dod-Chr9 35791230 35792198 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1441 - K03070 gmx:100793437 278.1