Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1434 ATGAGCTTCTTAAGGCCCTCTGCACTGTACAACTTTCTCATCACATTTGCTTCACTGCGATGGATGCCGTGTCAGAGCTGGGGCTTCCTTCGATGGCCGGGTCTCGACGGCTTCATGAGGCTTTTGGTGGTTGTGCTTCTCTGGACTATGTTCTCTGAGCTTCGCTACATACCCTCATCTTCCATGTACCCCACCCTTCGTGTTGGCGATCGAATTATTGTCGAGAAGGCTTCATATTACATTAGGAGTCCTGCTGTACATGATATTGTAACATTCCGGCATCCAACACAGGTTCATCATGGGGGACTCTATGTCAATGGTGTTGCGCAGGAGGAAGATTTCATAGCAGGGCCACTAACATACACAATGGAGTTAACTCATGTGCCCAAAGGCTGTGTTTATGTGTTGGGGGATAATCGTAATAACAGCTATGACTCTCATGTTTGGGGACCACTTCCGGTAAAAAATATAGTTGGAAGATACGTCATGTCTTGTCACAGGCCAACAAACATTTGA 516 0.4671 MSFLRPSALYNFLITFASLRWMPCQSWGFLRWPGLDGFMRLLVVVLLWTMFSELRYIPSSSMYPTLRVGDRIIVEKASYYIRSPAVHDIVTFRHPTQVHHGGLYVNGVAQEEDFIAGPLTYTMELTHVPKGCVYVLGDNRNNSYDSHVWGPLPVKNIVGRYVMSCHRPTNI* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1434 171 TIGRFAM sigpep_I_bact: signal peptidase I 39 163 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod09g1434 171 Pfam Signal peptidase, peptidase S26 101 163 IPR019533 GO:0004252|GO:0006465
Dod09g1434 171 Pfam Signal peptidase, peptidase S26 38 97 IPR019533 GO:0004252|GO:0006465
Dod09g1434 171 PANTHER SIGNAL PEPTIDASE I 97 170 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod09g1434 171 PANTHER CHLOROPLAST PROCESSING PEPTIDASE-LIKE 1 97 - -
Dod09g1434 171 ProSitePatterns Signal peptidases I serine active site. 59 66 IPR019756 GO:0004252|GO:0016021
Dod09g1434 171 PANTHER SIGNAL PEPTIDASE I 1 97 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod09g1434 171 SUPERFAMILY LexA/Signal peptidase 50 163 IPR036286 -
Dod09g1434 171 PANTHER CHLOROPLAST PROCESSING PEPTIDASE-LIKE 97 170 - -
Dod09g1434 171 ProSitePatterns Signal peptidases I signature 3. 133 146 IPR019758 GO:0004252|GO:0016021
Dod09g1434 171 Gene3D Umud Fragment, subunit A 47 170 - -
Dod09g1434 171 PRINTS Bacterial leader peptidase 1 (S26A) family signature 128 147 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod09g1434 171 PRINTS Bacterial leader peptidase 1 (S26A) family signature 50 66 IPR000223 GO:0006508|GO:0008236|GO:0016020
Dod09g1434 171 CDD S26_SPase_I 53 160 IPR019533 GO:0004252|GO:0006465
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1434 Dod-Chr9 35740672 35746743 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1434 K03100 - gmx:100306121 293.123