LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod09g1433	ATGAAAGCACGCTTCTTGCCCTTTCTATGTGTTTTACTTTTAATTCAACTGCTGCTACTGCTGACAGTGTGTGCAGCAGAAGATGACCATGAAGTCACTTCTTCCACCAGCATCATCTTCACCACATACGGCAGATCCAACTATGCCTTCGACATCTACTCCCTCCCAATTCACCATTCCTCCCCCTTAAACCCTAACTCTGAGCTTCAACTCACCGATGGTCACTCCGTCAACTTCAACGGCCACTTCCCCAGCCCCGCCTCCTCCTCCTTCCTCCTCCCCAACCACTCCGCCATCCACCTCCCCACCGATCCTCCACCTCTTCCACTGATCTACGTCACAGAGCGAAACGGCATCCACAACATCTACTACGACGCCGTTTACCCTCGCCAACCTTCCACTCCAACAAGGAGATCCACCCTCGAAACCCCAAATAGAATACAGGTCCCTCTGTTGCCTATTAATCGTTACCAAAAGAATCAAGTTTCCATGAAAGACAAGCCAACCCTCACCGGAGAGCACCTTATCTACGTGTCAACCCACGAGGACCCTGGCGTCCCCCGTGCCAGCTGGGCCGCCGTTTACTCCACGCACCTCCAATCCGGCCACACCCGAAGGCTAACCCCAGATGGCGTCGCCGATTTCAGCCCCGCCGTCTCCCCCTCCGGCCACTGGACTGCCGTCGCCTCCTATGGCTCCCGCGGCTGGTCCGGCGACGTCGACGATCTCACCACCGACATCTACGTCTTCTTGACTCGGGATGGCACTCACCGGGTCAAGGTGGTCGAACACGGTGGCTGGCCAAGCTGGGTCGACGATCGCACCATCTACTTCCACCGCGGGGGCCAAGACCAGTGGTGGAGCGTTTACAGAGCGATCCTCCCCGCGGCGGGTCAAATCTCCGTCGACTCGGTGGTGGTCCAACGAGTCACCCCGCCGGGTCTCCACGCGTTCACTCCGGCAACCTCACCGGGAAACCACGACTTCATCGCCGTCGCAACGAGGAGGCCGGGCTCGAGTGTCCGCCACATCGAGCTATTCAACCTGGTCAAGAACGAGTTCACCGAGTTGACTCGTTTCGTCTCGCCTGGTGCTCACCACCTCAACCCTTTCATCTCACCCGATTCGACCCGGGTCGGGTACCATAAATGCAGGGGCGAACCCACCGTAAACGAATCCCCTCCGCTATTACTTGAGAACGTTAAGAGCCCCGTTCCCGGTCTAACAATCTTCCGATTCGCCGGTTCGTTCCCGGTTTTCTCGCCTTCGGGAGACCGAATCGCTTACGTGGACATGCCAGGCGTTTACGTCGTGAACCGGGACGGTTCAAACCTGCGAAAGGTTTCGGACGCGATGGCGTTCTCGACCGCGTGGGACCCGGTTCGACCGGGGATTATCTACACTGCGATTGGTGAAACTTTCGCTCCAGAGAGCGCGCGCGTTGACATCGTGTCCATCAACGTTGATAGCGTTGACGGGAAAAACAAGATCAAGCGGTTGACGATTGATGGGGAGAACAACGCTTTTCCGTCGGTTTCACCAGACGGGAAATGGATCGTGTTCCGTTCGGGCCGTTCGGGCCATAAGAATCTTTACGTGATGGACGCGGCGGGTGGGGAGAGATATGGGCTGAGGAGGTTGACGGAAGGCCCATGGACCGACACGATGTGTAACTGGTCACCCGATGGGGAATGGATCGCTTTTGCTTCGGACCGGCATAACCCGGGTGGAGGGAGCTTTGAGTTGTACCTGATCCACCCGGATGGAACCGGGTTGAGGAAGTTGATTGAGAGCGGGTCGGGTGGGAGGACCAATCACCCGGGCTTTAGCCCGGATGGGAAGAGGGTTGTGTTTACTTCGGACTATGCGGGGATCTCTGCTGAGCCCATCTCGAACCCGCATCATTACCAGCCGTATGGTGAGATATTCACCGTTAGATTGGACGGGTCGGGTATAGAGAGGTTGACTCACAATTCGTATGAGGATGGAACCCCTGCCTGGTCACCGAAACATATAAAGCCCGTGGATATTGAGAGGCCTAAGGGTGAACCCTATTGCCATTTTGAAGATTGTCACTGGCTTAGCGACATGCCAAACGCGGGTGTTGCCGGTGCTTCTTTTATGACTAGTCGTCGTCTTGTATCGAACGCTCAGCCTCAGTGTGGTATGTAG	2172	0.5645	MKARFLPFLCVLLLIQLLLLLTVCAAEDDHEVTSSTSIIFTTYGRSNYAFDIYSLPIHHSSPLNPNSELQLTDGHSVNFNGHFPSPASSSFLLPNHSAIHLPTDPPPLPLIYVTERNGIHNIYYDAVYPRQPSTPTRRSTLETPNRIQVPLLPINRYQKNQVSMKDKPTLTGEHLIYVSTHEDPGVPRASWAAVYSTHLQSGHTRRLTPDGVADFSPAVSPSGHWTAVASYGSRGWSGDVDDLTTDIYVFLTRDGTHRVKVVEHGGWPSWVDDRTIYFHRGGQDQWWSVYRAILPAAGQISVDSVVVQRVTPPGLHAFTPATSPGNHDFIAVATRRPGSSVRHIELFNLVKNEFTELTRFVSPGAHHLNPFISPDSTRVGYHKCRGEPTVNESPPLLLENVKSPVPGLTIFRFAGSFPVFSPSGDRIAYVDMPGVYVVNRDGSNLRKVSDAMAFSTAWDPVRPGIIYTAIGETFAPESARVDIVSINVDSVDGKNKIKRLTIDGENNAFPSVSPDGKWIVFRSGRSGHKNLYVMDAAGGERYGLRRLTEGPWTDTMCNWSPDGEWIAFASDRHNPGGGSFELYLIHPDGTGLRKLIESGSGGRTNHPGFSPDGKRVVFTSDYAGISAEPISNPHHYQPYGEIFTVRLDGSGIERLTHNSYEDGTPAWSPKHIKPVDIERPKGEPYCHFEDCHWLSDMPNAGVAGASFMTSRRLVSNAQPQCGM*	724

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod09g1433	723	SUPERFAMILY	Tricorn protease N-terminal domain	416	669	-	-
	Dod09g1433	723	Pfam	WD40-like Beta Propeller Repeat	604	621	IPR011659	-
	Dod09g1433	723	Pfam	WD40-like Beta Propeller Repeat	545	583	IPR011659	-
	Dod09g1433	723	Pfam	WD40-like Beta Propeller Repeat	504	533	IPR011659	-
	Dod09g1433	723	Gene3D	-	413	575	IPR011042	-
	Dod09g1433	723	Gene3D	-	576	679	IPR011042	-
	Dod09g1433	723	Gene3D	-	158	396	IPR011042	-
	Dod09g1433	723	SUPERFAMILY	DPP6 N-terminal domain-like	176	467	-	-
	Dod09g1433	723	PANTHER	DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN	34	690	-	-
	Dod09g1433	723	PANTHER	DPP6 N-TERMINAL DOMAIN-LIKE PROTEIN	34	690	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod09g1433	Dod-Chr9	35736346	35739756	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod09g1433	-		-	aprc:113853220	1070.46