Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1423 ATGCAAAGGTTCGCTACCAAAATAGTCGACATGATGAAGTCAGCCAACCTTTATGCTTCTCAAGGAGGGCCTATTATACTATCGCAGATTGAGAATGAATATGGAAACGTTGAAGGGGCGTTTCATGAGCTAGGAGCTTCCTATATTCGTTGGGCTGCTCAAATGGCCGTGGGTCTCCAAACCGGGGTGCCTTGGTTAATGTGCAAGCAAGATGATGCCCCTGATCCAGTGATCAACACTTGCAATGGTATGCAGTGTGGGACAACATTTAAGGGGCCTAACTCGCCTAGCAAGCCTTCAATGTGGACAGAGAATTGGACTAGTTTCTATCAAGTCTTTGGAGGAGAGCCATACTTAAGATCAGCTCAAGACATTGCTTATAATGTTGCCTTGTTCATTGCAAAAGGGGGAAGCTATGTCAATTACTACATGTACCATGGAGGAACCAATTTCGACAGAATGGCATCTGCTTATGTAACAACGGCTTATTATGACGAAGCTCCACTTGATGAATATGGCTTGGTTAGGCAACCAAAATGGGGCCATCTTAAGGAGCTACATGCTGCAATCAAGTCATGTTCCGAAGCCTTACTTTATGGAACTCAAACCACCTTCAGCTTGGGTGCACAGCAACAAGCTTATGTTTTCCAAACGAACTCAACAGAATGTGTTGCCTTCCTGGAAAATAGTGATGCCAGGGATGTCACAATCCAATTTCAAAATATTCCATATCAATTACCTGCAAAATCAATCAGTATTCTACCAGGCTGCAAGAATGTAGCCTTCAACACCGCCAAGGTAAGCACACAAAATGATGTCAGAGCAATGAAATCACAGTTACAGTTCAACTCAGCTGAAAATTGGAAAGTGTACACAGAAGCCATCCCTAACTTTGATGATACTTCATTAAGAGCAACTACACTATTAGACCAAATCAGCACAGTAAAAGATACATCTGACTATATGTGGTACACTTTCAGGTTTGATGACAACTCTCCTATTGCTCAATCTACGCTTAGTGTAGAAAGCCGAGGGCATGTTTTGCATGTGTTCATCAATGGAGTTTTAGTAGGTTCTGCACATGGGAGTCACCAGAGTAATTCCTTCATGGCAGAGTACAACGTCAATCTGAGAAATGGGATGAACAATGTTTCCTTACTAAGTGCAACAGTTGGATTGCTGAATTCAGGAGCATATCTAGAGCGCAGACTTGCTGGTTTGCGTACGGTAAAAGTTCAAGGCAGAGATATCTCTAATCAACCATGGGGATATCAGGTTGGACTGTTGGGAGAAAAATTGCAAATCTATACACATGTTGGATCAAGTAAAGTTCACTGGGAAAGTTTTCAAAGCTGTATGAAACCACTCACATGGTATCAGACCACATTTGATGCACCGGCAGGCAATGATCCTGTAGCGCTTAACCTTGGTTGTATGAGAAAGGGGGTTGCTTGGGTTAATGGCCAAGGTATCGGCCGATATTGGGTATCTTTTCACACACCAAATGGTATTCCTTCACAGCAATGGTATCACATACCCCGATCCCTCCTAAAATCTACCGGGAACCTACTAGTTCTACTTGAAGAAGAAACCGGGAACCCACTAGAAATTACTCTAGACACAGTTTACATCTCGGTGAAAGATGGCACATCATGA 1656 0.4293 MQRFATKIVDMMKSANLYASQGGPIILSQIENEYGNVEGAFHELGASYIRWAAQMAVGLQTGVPWLMCKQDDAPDPVINTCNGMQCGTTFKGPNSPSKPSMWTENWTSFYQVFGGEPYLRSAQDIAYNVALFIAKGGSYVNYYMYHGGTNFDRMASAYVTTAYYDEAPLDEYGLVRQPKWGHLKELHAAIKSCSEALLYGTQTTFSLGAQQQAYVFQTNSTECVAFLENSDARDVTIQFQNIPYQLPAKSISILPGCKNVAFNTAKVSTQNDVRAMKSQLQFNSAENWKVYTEAIPNFDDTSLRATTLLDQISTVKDTSDYMWYTFRFDDNSPIAQSTLSVESRGHVLHVFINGVLVGSAHGSHQSNSFMAEYNVNLRNGMNNVSLLSATVGLLNSGAYLERRLAGLRTVKVQGRDISNQPWGYQVGLLGEKLQIYTHVGSSKVHWESFQSCMKPLTWYQTTFDAPAGNDPVALNLGCMRKGVAWVNGQGIGRYWVSFHTPNGIPSQQWYHIPRSLLKSTGNLLVLLEEETGNPLEITLDTVYISVKDGTS* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1423 551 Gene3D Glycosidases 1 194 - -
Dod09g1423 551 SUPERFAMILY (Trans)glycosidases 2 193 IPR017853 -
Dod09g1423 551 Pfam Glycosyl hydrolases family 35 1 189 IPR031330 -
Dod09g1423 551 Pfam Beta-sandwich domain in beta galactosidase 197 267 IPR041392 -
Dod09g1423 551 Gene3D - 281 420 - -
Dod09g1423 551 SUPERFAMILY Galactose-binding domain-like 251 407 IPR008979 -
Dod09g1423 551 PANTHER BETA-GALACTOSIDASE RELATED 1 545 IPR001944 GO:0004553|GO:0005975
Dod09g1423 551 SUPERFAMILY Galactose-binding domain-like 421 544 IPR008979 -
Dod09g1423 551 PANTHER BETA-GALACTOSIDASE 1 545 - -
Dod09g1423 551 Gene3D - 421 548 - -
Dod09g1423 551 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 22 34 IPR019801 GO:0004553|GO:0005975
Dod09g1423 551 PRINTS Glycosyl hydrolase family 35 signature 138 153 IPR001944 GO:0004553|GO:0005975
Dod09g1423 551 PRINTS Glycosyl hydrolase family 35 signature 157 173 IPR001944 GO:0004553|GO:0005975
Dod09g1423 551 PRINTS Glycosyl hydrolase family 35 signature 20 35 IPR001944 GO:0004553|GO:0005975
Dod09g1423 551 PRINTS Glycosyl hydrolase family 35 signature 454 468 IPR001944 GO:0004553|GO:0005975
Dod09g1423 551 PRINTS Glycosyl hydrolase family 35 signature 101 116 IPR001944 GO:0004553|GO:0005975
Dod09g1423 551 PRINTS Glycosyl hydrolase family 35 signature 481 497 IPR001944 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1423 Dod-Chr9 35658449 35668147 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1423 1 544 Glycoside Hydrolase AT5G63800 58.333 0.0 676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1423 - - pvu:PHAVU_009G127500g 932.554