Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1419 ATGAAAATTCTCAACTCCCTGATCCTATTCGTATTAATCTTCATAACGCCGGCGGTTCATCTCACCGACCAGATACCTTCCGCCGTATACGACGGCGTCCTGTTCGCCGGCCACAAGGAAGCGGTTCCTCCGTCATCCACCAAAAACCACACCGCTCGTCGAGCGGCGGCGGCGGGGGAGGAGGAGGACGATGGTGAGGAGTGTGAGGCGTGGAGCAAGGCGTGCTCGGACGCGGTGCTCCGGGTGGCGGGGCGTCGGGAGACGGCGGAGTGGCTGAGGAGTGTGCGGCGGAGGATCCACGAGAATCCGGAGCTGGCGTTCGAGGAAATCGAGACGAGCCGTTTGATCCGAGAGGAGCTGGATCTGATGGGAGTGGGTTACCGTTACCCGCTGGCCAAGACCGGTATTCGTGCGTGGATCGGCACCGGTGGTCCGCCTTTTGTTGCCATCAGAGCTGACATGGATGCACTTCCCATCCAGGAAGCTGTGGAATGGGAGTACAAGTCTAAAGTTGCTGGCAAAATGCATGCTTGTGGGCACGACGCACATGTGGCTATGCTTATTGGTGCTGCGAAGATCTTGAAAACTCGAGAGCATTTATTAAAGGGAACTGTAATTCTGCTATTTCAGCCAGCGGAGGAAGCTGGTAATGGCGCAAAGCGAATGATACAAGATGGTGCTTTGGAAGACGTGGAGGCCATATTTGCTGTTCATGTATCCCATCAGCATCCAACTTCTATCATCGGTTCGAGGCCAGGTCCATTGCTGGCTGGCTGTGGATTTTTCAGAGCTGTGATCAGTGGCAAAAAGGGCCTCGCTGCCGATCCACACCACTCTGTTGACCCAGTTCTGGCCGCTTCAGCTGCTGTCATCAGCTTACAGGGTATCGTCTCGCGCGAATCGAATCCCTTGGATTCACAGGTTGTGTCTGTGACTTCATTCAATGGAGGCAACGATCTTGACATGATACCGGACACGGTGGTTCTCGGTGGAACTTTCAGAGCTTTCTCTAACACCAGTTTTTATCAGCTGCTTGAAAGAATAGAGCAGGTGATTGTGGAACAGGCCGGTGTCTACAGATGTTCCGCCGTGGTTGACTTCTTTGAAAAGGAGTACACCATTTATCCTCCCACAGTCAATGATGACAAAATGTATGAGCATGTGAAGAAGGTGTCCATTGATTTGCTGGGTCAAACCAATTTCATGCTAGTCCCACCCATGATGGGTGCCGAAGATTTCTCATTTTACTCTCAGGTGGTCCCTGCGGCTTTCTTCTACATAGGGATAAGGAATGAGACACTAGGGTCTACTCACACCGGACACTCCCCTCATTTCATGATTGATGAAGACGTTCTACCAATAGGGGCAGCAGCTCATGCCACCATTGCAGAGAGGTACCTCATTGAGTATGGGTGA 1416 0.5254 MKILNSLILFVLIFITPAVHLTDQIPSAVYDGVLFAGHKEAVPPSSTKNHTARRAAAAGEEEDDGEECEAWSKACSDAVLRVAGRRETAEWLRSVRRRIHENPELAFEEIETSRLIREELDLMGVGYRYPLAKTGIRAWIGTGGPPFVAIRADMDALPIQEAVEWEYKSKVAGKMHACGHDAHVAMLIGAAKILKTREHLLKGTVILLFQPAEEAGNGAKRMIQDGALEDVEAIFAVHVSHQHPTSIIGSRPGPLLAGCGFFRAVISGKKGLAADPHHSVDPVLAASAAVISLQGIVSRESNPLDSQVVSVTSFNGGNDLDMIPDTVVLGGTFRAFSNTSFYQLLERIEQVIVEQAGVYRCSAVVDFFEKEYTIYPPTVNDDKMYEHVKKVSIDLLGQTNFMLVPPMMGAEDFSFYSQVVPAAFFYIGIRNETLGSTHTGHSPHFMIDEDVLPIGAAAHATIAERYLIEYG* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1419 471 Pfam Peptidase dimerisation domain 262 356 IPR011650 -
Dod09g1419 471 PANTHER PEPTIDASE M20 FAMILY MEMBER 46 470 IPR017439 GO:0016787
Dod09g1419 471 MobiDBLite consensus disorder prediction 42 65 - -
Dod09g1419 471 Gene3D Zn peptidases 94 460 - -
Dod09g1419 471 Pfam Peptidase family M20/M25/M40 149 464 IPR002933 GO:0016787
Dod09g1419 471 Gene3D - 257 376 - -
Dod09g1419 471 SUPERFAMILY Zn-dependent exopeptidases 87 468 - -
Dod09g1419 471 TIGRFAM amidohydrolases: amidohydrolase 93 455 IPR017439 GO:0016787
Dod09g1419 471 PIRSF Amidohydrol_AmhX 81 469 IPR017439 GO:0016787
Dod09g1419 471 PANTHER IAA-AMINO ACID HYDROLASE ILR1-LIKE 6 46 470 - -
Dod09g1419 471 CDD M20_IAA_Hyd 92 467 IPR044757 GO:0009850|GO:0016787
Dod09g1419 471 SUPERFAMILY Bacterial exopeptidase dimerisation domain 258 366 IPR036264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1419 Dod-Chr9 35582644 35589348 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1419 K21604 K14664 gmx:100800794 755.362