Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1416 ATGGCGTATAGGGTTACGATCTGCTTCCTCTTCGTGGCTTTGGCTCTGTCTCTCCCCGCCTTTAAGATCTGCGCGGATGAATCGGCGGAGGCCGCCAAGGAATTCGTGCTGACGTTGGATCACACCAACTTCTCTGACATTGTCAGCAAGCACGACTTCATCGTCGTCGAGTTCTACGCTCCTTGGTGTGGCCACTGTAAGAAGCTTGCTCCGGAGTATGAGAAGGCTGCTTCTATCTTGAGTAGTCATGATCCTCCGGTTGTTTTGGCTAAAGTTGATGCGAATGAGGAGAAGAACAAAGAGCTTGCAAATGAGTATGACGTTAAGGGATTCCCAACAATTAAGATCCTCAGAAGTAAGGGAAAGAATATTCAAGAATACAAAGGTCCCCGCGAAGCAGATGGTATTGTTGAGTATTTGAAGAAACAGAGTGGGCCTGCATCTACTGAAATTAAATCTGCTGATGATGCTAGTGCTTTTATTGGCGAAAACAAAGTTGTTATTGTTGGTATTTTTCCTAAATTTTCTGGGGAGGAGTATGAGAACTTTACAGCATTTGCAGAAAAGTTGCGTTCTGATTATGACTTTGGTCACACTCTTGATGCCAAACACCTTCCACGGGGAGAATCAACAGTGACTGGGCCTGTAGTTAGATTAATCAAGCCATTTGACGAGCTTTATGTTGACTTCAAGGATTTCCATGTTGAAGCTCTAGAGAAATTTGTTGAAGAATCTAGCATCCCTGTTGTGACTGTCTTTAACAATGAACCAAGCAATCACCCTTTTGTTGTCAAATTCTTTAACAGTCCCAATGCAAAGGCAATGTTGTTCATCAACTTCACTGCCGAAGGTGCTGAATCTTTCAAATCAAAATACCGTGAAGCTGCTGAGCAATATAGAACACAGGGTGTAAGCTTTCTGATTGGAGATGTTGAGGCTAGCCAGGGTGCCTTCCAGTATTTTGGACTTAAGGAAGACCAAGTACCTCTGGTTATCGTACAACATAATGATGGGAAGAAATTTTTTAAACCCAATTTGGAACCTGATCACATTTCAACTTGGTTCAAGGAATACAAGGATGGAAAAATTGCACCGTATTTGAAGTCCGAGCCTATTCCCGAAACTAACAATGAACCTGTTAAGGTGGTAGTGGGGGACAGTCTTCAGGACATAGTTTTCAATTCAGGGAAGAATGTTTTGCTGGAGTTTTATGCCCCGTGGTGTGGTCATTGCAAAAAGTTAGCTCCAATATTGGATGAGGTTGCTGTCTCATATCAAAGTGATGCTGATGTTATCATTGCCAAACTGGATGCAACTGCCAACGATATCCCAAGCAATTCCTTCGAAGTCCAAGGATATCCAACTGTGTACTTCCGGTCAGCTAGTGGAAACATAACACCATATGACGGAGATAGGACGAAGGAAGACATCATACAATTCATTGAAAAGAACCGGGACAAACCTGCACAGCAAGAACAAGCGAAAGATGAGCCTGCCCAGCAAGAAAAGGCAAAAGATGAGCTTTGA 1527 0.4316 MAYRVTICFLFVALALSLPAFKICADESAEAAKEFVLTLDHTNFSDIVSKHDFIVVEFYAPWCGHCKKLAPEYEKAASILSSHDPPVVLAKVDANEEKNKELANEYDVKGFPTIKILRSKGKNIQEYKGPREADGIVEYLKKQSGPASTEIKSADDASAFIGENKVVIVGIFPKFSGEEYENFTAFAEKLRSDYDFGHTLDAKHLPRGESTVTGPVVRLIKPFDELYVDFKDFHVEALEKFVEESSIPVVTVFNNEPSNHPFVVKFFNSPNAKAMLFINFTAEGAESFKSKYREAAEQYRTQGVSFLIGDVEASQGAFQYFGLKEDQVPLVIVQHNDGKKFFKPNLEPDHISTWFKEYKDGKIAPYLKSEPIPETNNEPVKVVVGDSLQDIVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQSDADVIIAKLDATANDIPSNSFEVQGYPTVYFRSASGNITPYDGDRTKEDIIQFIEKNRDKPAQQEQAKDEPAQQEKAKDEL* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1416 508 CDD PDI_b_family 148 244 - -
Dod09g1416 508 ProSitePatterns Thioredoxin family active site. 55 73 IPR017937 -
Dod09g1416 508 ProSiteProfiles Thioredoxin domain profile. 358 486 IPR013766 -
Dod09g1416 508 Gene3D Glutaredoxin 249 373 - -
Dod09g1416 508 SUPERFAMILY Thioredoxin-like 246 377 IPR036249 -
Dod09g1416 508 PRINTS Thioredoxin family signature 62 71 - -
Dod09g1416 508 PRINTS Thioredoxin family signature 107 118 - -
Dod09g1416 508 PRINTS Thioredoxin family signature 54 62 - -
Dod09g1416 508 Gene3D Glutaredoxin 145 248 - -
Dod09g1416 508 Gene3D Glutaredoxin 26 144 - -
Dod09g1416 508 Pfam Thioredoxin 381 483 IPR013766 -
Dod09g1416 508 Pfam Thioredoxin 36 142 IPR013766 -
Dod09g1416 508 Gene3D Glutaredoxin 374 488 - -
Dod09g1416 508 ProSitePatterns Thioredoxin family active site. 400 418 IPR017937 -
Dod09g1416 508 TIGRFAM pdi_dom: protein disulfide-isomerase domain 385 484 IPR005788 GO:0003756
Dod09g1416 508 TIGRFAM pdi_dom: protein disulfide-isomerase domain 41 143 IPR005788 GO:0003756
Dod09g1416 508 PANTHER PROTEIN DISULFIDE ISOMERASE 6 497 - -
Dod09g1416 508 Pfam Thioredoxin-like domain 172 356 - -
Dod09g1416 508 SUPERFAMILY Thioredoxin-like 36 146 IPR036249 -
Dod09g1416 508 TIGRFAM ER_PDI_fam: protein disulfide isomerase 36 508 IPR005792 GO:0003756
Dod09g1416 508 CDD PDI_a_family 37 140 - -
Dod09g1416 508 CDD PDI_b'_family 263 359 - -
Dod09g1416 508 MobiDBLite consensus disorder prediction 483 508 - -
Dod09g1416 508 SUPERFAMILY Thioredoxin-like 347 485 IPR036249 -
Dod09g1416 508 SUPERFAMILY Thioredoxin-like 149 248 IPR036249 -
Dod09g1416 508 CDD PDI_a_PDI_a'_C 379 481 - -
Dod09g1416 508 PANTHER PROTEIN DISULFIDE-ISOMERASE 6 497 - -
Dod09g1416 508 ProSiteProfiles Thioredoxin domain profile. 12 145 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1416 Dod-Chr9 35551879 35556011 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1416 K09580 - gmx:100170705 869.766