Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1400 ATGGGGGAGGAAGCTCTGACTCATTCGTTGAATGAGACTGAGGTTACAACTGTGATTTGTGGGCTTAAAGAATTGAGAACACTTGCTAATGTCCGTGGTCAACTTGGGATGGTGAAACGTGTGATATGTATGGATGAAAGTATCCCAACTGAAGTCTCATCAGCTCTGCATGGCTGGACAGTAATTTCCCTTGCAGAGGTTAAGACACTTGGTGGTGCCAAAGCCATGGTTGCGGCAGATTTACCCCTTCCGGGAGATGTTGCAGTTATAATGTACACAAGTGGAAGTACAGGAGGGCCTAAGCTGTACCAGCAATTCTTGATCGTGTACGTGATGGAGTGCTCAAGAAGTGCTACAATAGGTCAAGGATATGGTCTTACAGAGACATGTGCTGGTGGGTCAGTTACTGATGCTGATGATATAACAGTTGGTCGAGTTGGACCACCTATTCCTTGCTCATATGTTAAGCTAATCGACTGGCCTGAAGGTGGATATTTAGCTAATGACTCCCCATTGTCGCGTGGTGAAATTGTAATTGGTGGTTCAAATGTCACCCTTGGGTACTTCAAAAATGAAGAAAGACGAGAATCTTATAAGGTTGATGAAAGAGGAGTGAGGTGGTTCTACACAGGTGACATAGGGAGATTTCATGTAGATGGTTGCCTTGAAATCATTGATCGGAAAAAGGACATCGTTAAACTGCAACATGGAGAATACGTCTCCCTAGGAAAGCAAGGAATTGCTTATTCTGATCTTTTAGAGTTGTGCCGGAAAGAAGAAGCCGTGAAGGAGGTGTATGCATCACTTGTAAAGGAAGCAAAGAAGGCTCGTTTGGAAAAATTTGAGATCCCCAGAAAAATTATGTTGATTTCTGATCCATGGACTCCTGAATCTGGCCTAGTCACTGCAGCTCTCAAGATCAAGAGAGAGACTATTAAAAAGGCTTTCCAAGAAGATCTCTCAGAATTGTATGCTTCGTAG 981 0.4353 MGEEALTHSLNETEVTTVICGLKELRTLANVRGQLGMVKRVICMDESIPTEVSSALHGWTVISLAEVKTLGGAKAMVAADLPLPGDVAVIMYTSGSTGGPKLYQQFLIVYVMECSRSATIGQGYGLTETCAGGSVTDADDITVGRVGPPIPCSYVKLIDWPEGGYLANDSPLSRGEIVIGGSNVTLGYFKNEERRESYKVDERGVRWFYTGDIGRFHVDGCLEIIDRKKDIVKLQHGEYVSLGKQGIAYSDLLELCRKEEAVKEVYASLVKEAKKARLEKFEIPRKIMLISDPWTPESGLVTAALKIKRETIKKAFQEDLSELYAS* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1400 326 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 101 - -
Dod09g1400 326 Gene3D - 1 105 IPR042099 -
Dod09g1400 326 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 1 101 - -
Dod09g1400 326 Gene3D - 107 235 IPR042099 -
Dod09g1400 326 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 244 325 - -
Dod09g1400 326 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 116 244 - -
Dod09g1400 326 SUPERFAMILY Acetyl-CoA synthetase-like 2 318 - -
Dod09g1400 326 ProSitePatterns Putative AMP-binding domain signature. 90 101 IPR020845 -
Dod09g1400 326 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 116 244 - -
Dod09g1400 326 PANTHER BACTERIAL LONG-CHAIN FATTY ACID COA SYNTHETASE 244 325 - -
Dod09g1400 326 Pfam AMP-binding enzyme 2 101 IPR000873 -
Dod09g1400 326 Pfam AMP-binding enzyme 117 235 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1400 Dod-Chr9 35342991 35347979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1400 59 325 Acyl Lipid Metabolism Gene Families AT1G77590 54.167 4.81e-108 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1400 K01897 - gmx:100778889 344.354