LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dod09g1377	ATGCAGCAGGTTCATTGTATCCACACGCACCCACTCATGCGATTCACGCCTTCCTCCAAATTCCTCGGCTTTTCAAAGCATTTCCCCTTTGTTTTCTCTCCCTCTTATTCTTCTTCTTCTTCTTCTTCTTCCCCAAAGCTCCCATCTTTCGTTGCTGCCACCATGTCCACCACTGCTGTTTCCACCGAGAATGATACCTCCCCCCACAAAACCCAACATCCTTTGCAGGTTGCAAAGCGCTTAGAGAAGTTCAAAACAACAATTTTCACCCAAATGAGTATGCTTGCAGTCAAACATGGAGCCATAAACCTTGGTCAAGGATTTCCCAACTTTGATGGTCCGGATTTTGTGAAGGAAGCAGCAATTCGGGCCATCAGGGATGGGAAAAATCAGTATGCCAGGGGATATGGAGTTCCAGACCTGAACCTTGCCATTGCTGAAAGATTTAAGAAAGATACAGGACTTGTGGTGGATCCTGAAAAGGAAATTACTGTTACAAGTGGGTGCACAGAAGCAATTGCTGCAACTATATTAGGATTGATAAATCCCGGTGATGAGGTTATCCTGTTTGCTCCTTTTTATGATTCTTATGAAGCCACTTTATCCATGGCTGGTGCAACGATAAAAAGCATCACTTTGCGGCCTCCAGATTTTGCAGTCCCAATTGAAGAACTGAAGTCCACCATCTCAAAGAATACCCGTGCCATTCTTATTAATACTCCTCACAACCCTACTGGAAAGATGTTCACTCGAGAGGAACTCAACAACATTGCATCTCTTTGCATTGAGAATGATGTTCTGCTTTTCAGTGATGAAGTTTATGATAAGTTAGCATTTGATATGGAGCATATTTCACCGGCCTCTTTGCCTGGCATGTTTGAAAGGACTGTGACAATGAACTCCTTGGGGAAGACATTCTCCTTAACAGGATGGAAGATTGGTTGGGCCGTAGCACCCCCACACTTAACATGGGGAGTGCGACAGGCACACTCTTTCCTGACTTTTGCAACCTCCACTCCTATGCAGTGGGCAACTGCGGAAGCTCTTAGAGCACCAGATTCTTACTTTGTGGAGCTAAAGAGGGATTACATGGCAAAGAGAGCTATTTTGGTGGAAGGTTTGAATGCTGTCGGCTTTAAGGTATTCCCATCCAGTGGAACCTACTTTGTGGTTGTAGATCACACACCTTTTGGACTGGAAAATGATGTTGCATTTTGTGAATATCTAATTAAGGAGGTGGGAGTTGTGGCAATCCCCACCAGTGTATTTTACTTGAATCCAGAAGAGGGAAAGAATCTTGTGAGATTTACTTTCTGCAAGGATGAGGATACTCTTAGGGCTGCTGTTAAGAGGATGAAGGAGAAGCTTAGAAAATGA	1377	0.4415	MQQVHCIHTHPLMRFTPSSKFLGFSKHFPFVFSPSYSSSSSSSSPKLPSFVAATMSTTAVSTENDTSPHKTQHPLQVAKRLEKFKTTIFTQMSMLAVKHGAINLGQGFPNFDGPDFVKEAAIRAIRDGKNQYARGYGVPDLNLAIAERFKKDTGLVVDPEKEITVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGATIKSITLRPPDFAVPIEELKSTISKNTRAILINTPHNPTGKMFTREELNNIASLCIENDVLLFSDEVYDKLAFDMEHISPASLPGMFERTVTMNSLGKTFSLTGWKIGWAVAPPHLTWGVRQAHSFLTFATSTPMQWATAEALRAPDSYFVELKRDYMAKRAILVEGLNAVGFKVFPSSGTYFVVVDHTPFGLENDVAFCEYLIKEVGVVAIPTSVFYLNPEEGKNLVRFTFCKDEDTLRAAVKRMKEKLRK*	459

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dod09g1377	458	Pfam	Aminotransferase class I and II	102	451	IPR004839	GO:0009058\|GO:0030170
	Dod09g1377	458	Gene3D	-	114	352	IPR015421	GO:0003824
	Dod09g1377	458	Gene3D	Aspartate Aminotransferase, domain 1	91	452	IPR015422	GO:0003824
	Dod09g1377	458	CDD	AAT_like	102	454	-	-
	Dod09g1377	458	PANTHER	FI04487P	77	458	-	-
	Dod09g1377	458	PANTHER	FI04487P	77	458	-	-
	Dod09g1377	458	SUPERFAMILY	PLP-dependent transferases	77	457	IPR015424	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dod09g1377	Dod-Chr9	35122899	35125240	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Dod09g1377	K23977		-	gmx:100818968	766.148