Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1362 ATGCATCCTTTCTGCTGTGTCTCCGCTGTCTCCGACCAGTCCTCCCCCGTCAAACCCTCTCCGGCTCCCTTCCCTGACTTCTCCATGCCTCCTCTCCCCGCCGCCGCCGTTAGATCCGATTCGGCTCCACGCCACAGCCACAATCACATTCACGGAAGCAACCACTCCGCCGCCGGCGTCAACGGCGAGCACGGCCGGGGGAGCCATTTGCAGCAGCAGCGGGAGCAGGCTTCGCCGGCGCCGGCGGTTGTGGACGTGAACGTGAACGTGAAGATCAACGACCTCGTCGGGAACGGAATCTCCGGAATACTGTACAAGTGGGTGAACTACGGCAAAGGATGGAGACCTCGGTGGTTCGTGCTCCAAGACGGTGTTCTCTCCTACTACAAGATTCACGGTCCCGATAAGATCGTTGTCAATCCCGAGACCGAGAAAGGTTCCAAGGTCATCGGCGAGGAATCCATGCGCAGGATCTCCCGCAACCGCAACAATTCCAATCCCTACCAGCACCGTCGCAAGCCTTTCGGCGAAATCCACCTCAAGGTTTCGACGATTCGAGAGAGCAAATCCGATGACAAGCGATTCTCGGTGTTCACGGGAACGAAGAGGATGCACTTGAGGGCGGATACGCGTGACGATCGAGTGGCGTGGATGGATGCGCTGCAAGCGGTGAAGGACATGTTCCCGCGGATGTCCAACAGCGAGTTGATGGCTCCGGTGGACAATGTAACCATTTCGACGGAGAAGCTGAGGCAGAGGCTTCTAGAAGAAGGAGTGAAGGAGTCGGCGATTCAGGACAGCGAGCAGATTATGAGGACTGAGTTTGCGGCGCTCCAGAACCAGCTCGTGCTGCTCAAGCAGAAGCAATCGATTCTCATTGACACATTGCGGCAATTAGAGACAGAAAAAGTTGATCTGGAGAATACAGTCGTTGATGAGAGCCAAAGACAGTGGAATGATCAAGAGGCTTCCTCTGGATTAAGGCAGGAAAAATCTAGTGAAGGAAGTGCAAGTGAATCTGAGGATGATAATGAGAGAAATGATGCAGCAGAGGAAGAAACAGATGATGAAGACAATGCCTTTTTTGATACTCGCGATTTTCTATCATCCAGTTCTTTTAAAAGTAATGGGTCTGATTATAGAGTATCGTCTTTCTCTTCAGATGAGGATGGGTTCTATACATTTGAATCAGAGGAGGATGTAGATCCTGCAATTAGATCTGTTGGAAGCAACTACCCTCATGTTAAGCGGCGTAAGAAATTGCCTGATCCTATAGAAAAAGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATAGGGAAGGATCTAACAAAAGTTTGTCTCCCTGTTTATTTTAATGAGCCTCTCTCCTCCCTGCAAAAATGCTTTGAAGAAATGGAGTATTCATATCTGCTGGACCAAGCATACGAATGGGGGAGAACGGGTAACAACCTCATGAGGATTATGTGTGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCAACTGATGGAAGAATTTGCAAACCATTTAATCCATTACTCGGGGAAACATATGAGGCTAACTATCCAGACAAAGGCCTTCGTTTTTTCTCAGAGAAGGTCAGTCATCACCCAATGATAGTTGCGTGCCATTGTGAGGGTACAGGTTGGAAATTTTGGGGGGATAGCAACTTAAAGAGCAAATTCTGGGGCCGATCAATTCAACTTGACCCTGTTGGTATTTTGACTTTGGAATTTGATGATGGGGAGGTTTTCCAGTGGAGCAAGGTTACTACATCAATTTACAATCTCATATTGGGAAAGCTGTACTGTGATCACTATGGTACAATGCGTATAGAGGGAAACCGAGAATATTCATGCAAACTGAAATTCAAGGAGCAATCAATAATTGATCGAAATCCTCACCAGGTCCATGGTATCGTTCAAGATAGCAATGGAAAAACGGTATCAACTTTGTTTGGAAAATGGGATGAAAGCATGCATTATGTTAACGGAGACTACCCTGGCAAGGGAAAAGGTCATGAATCCTTGTCAGAAGCCCGTTTAATCTGGAAGCGAAGCAGGCCTCCTAAGATTCCCACTAGATATAACTTCACTCGCTTTGCCATCACATTAAACGAACTTACCCCTGGGTTGAAGGAAAAATTGCCACCTACAGACTCCAGGTTAAGACCAGACCAAAGGTATTTGGAAAATGGGGAGTATGAGATGGCAAATTCAGAGAAGCTACGGCTAGAGCAGCGGCAGCGGCAGGCTCGGAAGATGCAAGAGAGGGGTTGGAAACCACGGTGGTTTGCCAAGGATAAAGCGAGCGGTACCTACCGCTATTTAGGAGGGTATTGGGAGGCCCGGCATCAAGGAAACTGGGACAACTGTCCTGATATCTTTGGCCAAATTCCCTCGGACAATATTTCTGAAGAAGTCTTATGCCTACCCCACCAATGTTTCCCCGATATTTGGAGGAAAAATATCCTAGACTTGCCTACAGATGGAGCTCTCAGGATTTGA 2514 0.4805 MHPFCCVSAVSDQSSPVKPSPAPFPDFSMPPLPAAAVRSDSAPRHSHNHIHGSNHSAAGVNGEHGRGSHLQQQREQASPAPAVVDVNVNVKINDLVGNGISGILYKWVNYGKGWRPRWFVLQDGVLSYYKIHGPDKIVVNPETEKGSKVIGEESMRRISRNRNNSNPYQHRRKPFGEIHLKVSTIRESKSDDKRFSVFTGTKRMHLRADTRDDRVAWMDALQAVKDMFPRMSNSELMAPVDNVTISTEKLRQRLLEEGVKESAIQDSEQIMRTEFAALQNQLVLLKQKQSILIDTLRQLETEKVDLENTVVDESQRQWNDQEASSGLRQEKSSEGSASESEDDNERNDAAEEETDDEDNAFFDTRDFLSSSSFKSNGSDYRVSSFSSDEDGFYTFESEEDVDPAIRSVGSNYPHVKRRKKLPDPIEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCFEEMEYSYLLDQAYEWGRTGNNLMRIMCVAAFAVSAYASTDGRICKPFNPLLGETYEANYPDKGLRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIEGNREYSCKLKFKEQSIIDRNPHQVHGIVQDSNGKTVSTLFGKWDESMHYVNGDYPGKGKGHESLSEARLIWKRSRPPKIPTRYNFTRFAITLNELTPGLKEKLPPTDSRLRPDQRYLENGEYEMANSEKLRLEQRQRQARKMQERGWKPRWFAKDKASGTYRYLGGYWEARHQGNWDNCPDIFGQIPSDNISEEVLCLPHQCFPDIWRKNILDLPTDGALRI* 838
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1362 837 Gene3D - 98 228 IPR011993 -
Dod09g1362 837 SMART PH_update 98 228 IPR001849 -
Dod09g1362 837 ProSiteProfiles PH domain profile. 97 226 IPR001849 -
Dod09g1362 837 MobiDBLite consensus disorder prediction 315 361 - -
Dod09g1362 837 Gene3D - 518 691 - -
Dod09g1362 837 Coils Coil 737 760 - -
Dod09g1362 837 Pfam Pleckstrin homology domain 105 222 - -
Dod09g1362 837 Pfam Oxysterol-binding protein 432 786 IPR000648 GO:0008289
Dod09g1362 837 SUPERFAMILY Oxysterol-binding protein-like 427 808 IPR037239 -
Dod09g1362 837 PANTHER OSBP(OXYSTEROL-BINDING PROTEIN)-RELATED PROTEIN 1C 3 805 - -
Dod09g1362 837 SUPERFAMILY PH domain-like 100 226 - -
Dod09g1362 837 Gene3D - 729 791 - -
Dod09g1362 837 CDD PH_ORP_plant 100 233 - -
Dod09g1362 837 PANTHER OXYSTEROL-BINDING PROTEIN-RELATED 3 805 IPR000648 GO:0008289
Dod09g1362 837 MobiDBLite consensus disorder prediction 33 81 - -
Dod09g1362 837 MobiDBLite consensus disorder prediction 344 360 - -
Dod09g1362 837 MobiDBLite consensus disorder prediction 315 333 - -
Dod09g1362 837 Coils Coil 296 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1362 Dod-Chr9 34905179 34914385 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1362 K20456 - gmx:100137077 1356.66