Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1272 ATGTGTTATTGTAGTTATGGTTTGAGTGAAGAGAGAAAAGGCGGCGTCAACAATAACTCCGGTGAAACCAGAGGACAAACAACAGCAGCAGCAATGGCAACGATAATGCAGAGGCGCAGGATTGTTCCATTGGGCATGCTGAGAATGTTACTCGCTGCCACCATATGTTTCTTAGCTTTTACCTCTTTCTTACTTGTTCACGTTCACGTTACCCCTTCTCCCTCTCATCACAACTACTTCCATGACTTCCACAAGTTTCATGATCCGCAAAGCTGGACGCAAGAGGTCGCTCCGCTGAATTTATCCAAGGCTCCACGTGCTGCTCCCAAGTTGAATGATTCTAGTGGGGATTCAGATTATGAGAAACTGTGGAAGCCTCCGCCAAATCATGGGTTTGTGCCCTGTACAAAGCCTACTCCCAATTACAAGACTCCTGCCAAGTCGCGAGGTTACCTCTTAGTTCATACTAATGGCGGGCTTAACCAAATGCGTACGGGGATATGTGATATGATAGCTGTAGCTCGTATCATAAATGCTACTCTTGTAATTCCAGAACTTGATAAAAACTCATTTTGGAAGGACCACAGCAAGTTCTCTGATATCTTTGATGAAGAATGGTTCATTAATTCTCTAGCTAATGATGTAAAAATCATTAAGAAGCTTCCCAAAAAACTTGTTAATGCAACCAAAATGGTCATGCAGTTCAAAAGCTGGTCTGGTATGGAATACTATGAGAATGATATCGCTTCCATGTGGGATTATTACAAAGTTATTCGAGCTTCCAAATCTGATTCTCGATTAGCAAATAATAAACTACCTTCGGATATTCAGAAGCTTCGCTGCCGTGCCTGTTATGAATCTCTTCGTTTCTCTCCTCGTATTGAACGAATGGGAAAAATTTTGGTGGAGAGGATGAGGTCATTTGGTCCTTATATTGCATTACATTTACGTTATGAGAAAGATATGCTTGCATTTAGCGGGTGCACACATGATTTATCTATAGCTGAGGTTGAAGAGCTAAGGATTATCAGAGAGAACACATCATATTGGAAAAGAAAGTACATTAATCCAATAGAAGAGAGGTCAAAAGGGTTTTGCCCCTTAACTCCAACGGAAGTTGGAATTTTTCTTACTGCTCTTGGATACCCGTCAAACACTCCAATATATATTGCTTCTGGGGAGATATATGGGGGTGAGTCCCATATGACTGAGCTGCAATCACGCTATCCATTGTTAATGAGCAAGGAGAAATTGGGCTCCATTGAGGAACTTGAACCTTTCTATAATCATGCATCTCAAATGGCTGCTCTTGACTATACTGTATCGGTTGAAAGTGATGTATTTGTACATTCTTACCCGGGAAACATGGCAAGGGCAGTTGAAGGTCATCGTCGTTTTCTTGGGCGTGGAAGAACAATATCTCCAGACAGGAAAGGCCCTTGTTCATCTGTTTGA 1455 0.4186 MCYCSYGLSEERKGGVNNNSGETRGQTTAAAMATIMQRRRIVPLGMLRMLLAATICFLAFTSFLLVHVHVTPSPSHHNYFHDFHKFHDPQSWTQEVAPLNLSKAPRAAPKLNDSSGDSDYEKLWKPPPNHGFVPCTKPTPNYKTPAKSRGYLLVHTNGGLNQMRTGICDMIAVARIINATLVIPELDKNSFWKDHSKFSDIFDEEWFINSLANDVKIIKKLPKKLVNATKMVMQFKSWSGMEYYENDIASMWDYYKVIRASKSDSRLANNKLPSDIQKLRCRACYESLRFSPRIERMGKILVERMRSFGPYIALHLRYEKDMLAFSGCTHDLSIAEVEELRIIRENTSYWKRKYINPIEERSKGFCPLTPTEVGIFLTALGYPSNTPIYIASGEIYGGESHMTELQSRYPLLMSKEKLGSIEELEPFYNHASQMAALDYTVSVESDVFVHSYPGNMARAVEGHRRFLGRGRTISPDRKGPCSSV* 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1272 484 PANTHER OS02G0726500 PROTEIN-RELATED 32 478 - -
Dod09g1272 484 PIRSF UCP009360 9 480 IPR024709 -
Dod09g1272 484 Pfam GDP-fucose protein O-fucosyltransferase 151 466 IPR019378 -
Dod09g1272 484 CDD O-FucT_plant 151 472 IPR024709 -
Dod09g1272 484 PANTHER AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN 32 478 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1272 Dod-Chr9 33836209 33839664 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1272 51 479 Miscellaneous Gene Families AT1G22460 59.283 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1272 - - gmx:100807411 739.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod08g1241 08 17112393 17118880 Dod09g1272 09 33836209 33839664 PCT