Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1232 ATGGCATCGATCTCCGGCATTTGTTCCTCTTCCCACACACTCAAGTTCCGAAGCCGCTCTCGCCCGTTGACCAACCCCCTCCGAAAAGGACCCGAATTCGCCGCCTTCCAGGCCCGGCCAAGGCTCGGCCCGGATCGGGCCCTCTCCATCGCGCCCACTCAGTCCGTGGCCCGGGAGGTTCCGGCGGTCAGCGACGGCGTTGCGGCTGCGAAGAAGAAGAAGGAAGGGTTGGAGAAAGATCCACGGGCGCTGTGGCGGCGGTACGTGGAGTGGCTGTACCAGCACAAGGAGCTGGGGCTGTACCTGGACCTGAGTCGGGTCGGGTTCACGGATGAGTTCGTGGAGCAGATGGAGCCCCGATTCCAGGCTGCGTTTAAGGCCATGGAGGAATTGGAGAAGGGCGCGATTGCCAACCCCGATGAGGGCCGCATGGTGGGCCATTACTGGCTCAGAGACCCTAACCGTGCACCCAATTCGTTCCTCAAGGCCCAGATTGAGAACACTCTTGAAGCTATCTGCAACTTTGCCGATGATGTCCTCACTGGTAAGATTAAGCCTCCGTCTTCTCCCGAGGGTCGTTTTACTCATATACTCTCTGTGGGAATTGGAGGCTCGGCTCTTGGACCTCAGTTTGTTGCAGAGGCATTGGCTCCTGATAATCCCCTGCTCAAGATAAGGTTTGTGGACAACACAGATCCTGCTGGAATTGATCATCAGATTGCACAACTTGGTCCTGAGCTAGCTTCAACACTTGTAATAGTGATTTCAAAGAGTGGAGGTACCCCCGAGACTAGAAATGGCTTATTAGAAGTACAGAAGGCCTTTCGCGAAGCGGGCTTGGATTTTCCGAAACAGGGTGTTGCTATTACACAAGAAAATTCTTTGTTGGATAACACTGCCAGAATTGAGGGCTGGTTAGCTAGATTTCCTATGTTTGACTGGGTAGGAGGTAGAACTTCAGAGATGTCTGCAGTAGGTCTGCTTCCAGCAGCCCTTCAGGGCATTAACATTAGAGAAATGCTTGCTGGTGCTGCATTGATGGATGAGGCGAATAGAACTACTGTGTTAAAGAGTAATCCTGCAGCTCAACTGGCTTTGTGTTGGTACTGGGCTACAGATGGTGTAGGATCCAAGGATATGGTTATCCTTCCATATAAGGACAGCCTGTTATTATTTAGTAGATACTTGCAGCAGCTGGTCATGGAATCTCTAGGCAAGGAGTTTGACTTGGACGGCAATCGGGTCAATCAAGGGATTAGTGTCTATGGAAATAAAGGAAGTACAGATCAGCATGCCTATATTCAACAACTGAGGGAGGGCGTGCACAATTTCTTTGTGACATTCATTGAGGTGCTACGTGATAGACCCCCTGGTCATGATTGGGAACTTGAACCTGGTGTCACATGTGGTGACTATCTGTTTGGTATGCTACAGGGAACAAGATCAGCTCTGTATGCTAATAACCGAGAGTCAATCACAGTCACTGTACAAGAAGTGACACCAAGATCAGTTGGTGCTCTTATTGCACTCTATGAACGAGCTGTAGGGATATATGCCTCCCTTGTCAACATAAATGCTTACCATCAACCTGGTGTGGAAGCTGGTAAAAAAGCAGCAGGTGAGGTATTAGCACTTCAGAAGCGAGTGTTGGCTGTGCTAAATGAGGCAAGTTGCAAAGAGCCTGTTGAACCATTGACACTTGAAGAGGTAGCTGAGCGTTGCCATGCTCCAGAAGATATTGAAATGATTTACAAGATTATTGCTCACATGGCTGCCAATGACAGAGCACTGATTGCTGAAGGCAGCTGTGGTTCACCACGGAGCATCAGGGTTTTCCTTGGGGAGTGTAATGTTGATGAATTGTATGCTTGA 1872 0.4995 MASISGICSSSHTLKFRSRSRPLTNPLRKGPEFAAFQARPRLGPDRALSIAPTQSVAREVPAVSDGVAAAKKKKEGLEKDPRALWRRYVEWLYQHKELGLYLDLSRVGFTDEFVEQMEPRFQAAFKAMEELEKGAIANPDEGRMVGHYWLRDPNRAPNSFLKAQIENTLEAICNFADDVLTGKIKPPSSPEGRFTHILSVGIGGSALGPQFVAEALAPDNPLLKIRFVDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLDFPKQGVAITQENSLLDNTARIEGWLARFPMFDWVGGRTSEMSAVGLLPAALQGINIREMLAGAALMDEANRTTVLKSNPAAQLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFVTFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVQEVTPRSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLAVLNEASCKEPVEPLTLEEVAERCHAPEDIEMIYKIIAHMAANDRALIAEGSCGSPRSIRVFLGECNVDELYA* 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1232 623 Gene3D - 183 328 - -
Dod09g1232 623 SUPERFAMILY SIS domain 78 546 IPR046348 GO:0097367|GO:1901135
Dod09g1232 623 ProSitePatterns Phosphoglucose isomerase signature 2. 519 536 IPR018189 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 77 552 IPR001672 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 CDD SIS_PGI_2 378 542 IPR035482 -
Dod09g1232 623 Pfam Phosphoglucose isomerase 484 544 IPR001672 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 Pfam Phosphoglucose isomerase 126 453 IPR001672 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 623 - -
Dod09g1232 623 Hamap Glucose-6-phosphate isomerase [pgi]. 97 546 IPR001672 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 PRINTS Glucose-6-phosphate isomerase signature 385 406 IPR001672 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 PRINTS Glucose-6-phosphate isomerase signature 519 532 IPR001672 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 PRINTS Glucose-6-phosphate isomerase signature 197 216 IPR001672 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 PRINTS Glucose-6-phosphate isomerase signature 487 505 IPR001672 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 PRINTS Glucose-6-phosphate isomerase signature 505 519 IPR001672 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 PRINTS Glucose-6-phosphate isomerase signature 309 327 IPR001672 GO:0004347|GO:0006094|GO:0006096
Dod09g1232 623 CDD SIS_PGI_1 166 332 IPR035476 -
Dod09g1232 623 Gene3D - 329 528 - -
Dod09g1232 623 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 1 623 IPR001672 GO:0004347|GO:0006094|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1232 Dod-Chr9 33383115 33388382 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1232 K01810 - gmx:100791285 1098.96