Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1230 ATGACTAACACAACTGCCGAATTGTCTCGGGGTAATAGTGGTGCTACCATTCCCACTCCTAATTCCCAACCTGGGCCACCCGAGCATCAGCGTTCTCATGGTGCAAATACGGTTTTCAAGAGTGGGCCACTTTTCATATCTTCCAAAGGAATCGGATGGACATCCTGGAAGAAAAGGTGGTTTATTTTAACACAAACTTCACTTGTTTTCTTCAGAAGTGATCCGAGTGCTGTCCCTCAGAAAGGAGGTGAAGTGAATTTGACCCTTGGTGGCATTGACCTCAACAATTCAGGCAGTGTTGTTGTCAAACCAGAAAAGAAACTTTTGATTGTACAATTTCCTGATGGTCATGATGGACGAGCTTTCACACTTAAGGCTGAAACTGCAGACGATTTATATGAGTGGAAGACTGCACTTGAGAATGCTTTGGCACAAGCACCAATTGCTGGCAATGTGACCGAGCAAAATGTGAAAGATAAAGAACCAGTGAAATCTACAGTCACTGGCCGACCAATTTTACTTGCTCTAGAGGATGTTGATGGAACTCCAACATTTTTGGAGAAAGCCCTAAGGTTCATAGAAGAGCATGGAGCCAATGTTGAAGGGATCTTGCGACAAGCAGCTGATGTTGATGAGGTTGAACGACGAGTTCAGGAATATGAACAAGGAAAAGTTGAGTTTTCTGCAAATGAGGATGCACATGTTATTGGTGATTGTGTTAAGCATGTGCTTCGGGAATTGCCGTCATCTCCAGTCCCTGCATCTTGTTGCAAGGCACTGTTAGAAGCTTGCCGCACTGATCGTGGTAAAAGGGTTTCTGCTATGCGCACAGCAATAAATGACACTTTCCCTGAACCAAATCGCCGCTTGTTGCAAAGAATACTCTTGATGATGCAAACTGTGGCTTCCCGCAAAGCTGTGAATAGAATGAGCTCCTCAGCTGTGGCAGCTTGCATGGCACCCTTACTTCTTCGCCCTCTTCTAGCTGGAGAGTGTGAGATTGAAAATGATTTTGATGTAGGTGGTGATGGTTCTGCTCAACTTCTACAAGCAGCTGCAGCAGCCAACCATGCTCAAGCAATTGTCATAACTTTGTTAGAAGAATATAACAGTATATTTGGGGATGGTTCTGCAACCCCAGGACCTGATATATACACTGACTCAGAAGATGAGAGTGGATCTGAGAGTGAAGAAGCTACTGATGATGACTTGTCTTATGATGATGATGAATATGATGATGAGGAATCAACACAGGAGTCTGATGCAGATGATGATCTTGTTAGTGAACCCTATAGTGGGACAGGAGAGTCTGAGCCCAATAATGCTTCCGATGATAAGGACCATGACCATTCTAGTTTAAGTTCGACATCCTCAGGTGTGAATGAAGAATCTAAAGTACCTAATCAGTCCAGTATACCTGCTGATATAGTAGGAGGAGTTTCCGCTGACCATGCTACAATGCATGATTCAAAATTTCCCAACTCTTCTTCATCTATCAAAAAATCTATGACAATATCCAATGGCCCAGCACCTCGGCAGCGCAACTTATTAGGGCGTACCTCTGCAAGGAAGAACCTTTCCATGGAATCCATTGATTTTCCTCTTGATGATGAAGATGAAATTGAAAGGCTTGAAGATGCTAGAAAAGAATTACAAAACCAAATTATAGAGGAGGTGAAGGCAAATGAAAAGCTGCAATCTCATATGGAAAATAGAAAGAAAGTCCTGCAAGAGCGTCGTCTGGCTCTTGAGCAAGATGTAGCTAGACTACAGGAGCAGTTGCATAAGGAGAAGAATTCTCGAGCAATTCGTGAGACCAAGGCAGATCTTGAGGAGCTAGCTCTGGTAGAGGTAGATCTTGCCAACTTAGAGCAGAAGGTTAGTGAGCTTGGGGTGCGGCTTAATGTACAACTCCAGCGGAATGATGGATCTACTTCGGATTTCTGTGATAGCCCACAACAAATATCAAACCATGAAAGAAAAGTGAAAAATATGCCGGATACTGAAGTTATTGATGCATCACAATCTGACAGATCAATTAGCAAGGACACTTATGGTGGAACAGAAAATGTTAGTGAGAGGAGGCCAGAGTCAACACCTTTACCAGACAAACATCTACCAACTGGTTCCAAGAAATCTGGTTCAAAGGGTGAGGGAGCAAATTCCACTACTTCTGCAATGACAAAACTGACATCGAGACTGAACTTTTTGAAGGTGCGCCGAGGCCAAGCTGCGAATGAACACCACAATCCGGATAAAAGCATGGAGTCCAGTCACTCTGCGCGCAGCCAAGATAAAGGAAAAGGATCTGAACATGACCAGTCACTTCCATCCCCCAATAGGCATGGGGGATTCGAGACTGCGCCAAGCCAAGAAAAGTGTAGAGGGTTGGACAGTTCTCAGTCACTCCAAATTTCAGATTTTGGTTCAGGCAAAGGTAAATCTCTCCAAAAGTCAGACAAATTGAGAAAATCAGATAGTCAGCCACGCCATCACTTAGATGCATGGAATCCAAATCCAAAACACTTGGAACGAGGACTGTCAGAAGGGCATCATCAGTATTATAATGTGGATAAAGGTCGATGA 2586 0.4377 MTNTTAELSRGNSGATIPTPNSQPGPPEHQRSHGANTVFKSGPLFISSKGIGWTSWKKRWFILTQTSLVFFRSDPSAVPQKGGEVNLTLGGIDLNNSGSVVVKPEKKLLIVQFPDGHDGRAFTLKAETADDLYEWKTALENALAQAPIAGNVTEQNVKDKEPVKSTVTGRPILLALEDVDGTPTFLEKALRFIEEHGANVEGILRQAADVDEVERRVQEYEQGKVEFSANEDAHVIGDCVKHVLRELPSSPVPASCCKALLEACRTDRGKRVSAMRTAINDTFPEPNRRLLQRILLMMQTVASRKAVNRMSSSAVAACMAPLLLRPLLAGECEIENDFDVGGDGSAQLLQAAAAANHAQAIVITLLEEYNSIFGDGSATPGPDIYTDSEDESGSESEEATDDDLSYDDDEYDDEESTQESDADDDLVSEPYSGTGESEPNNASDDKDHDHSSLSSTSSGVNEESKVPNQSSIPADIVGGVSADHATMHDSKFPNSSSSIKKSMTISNGPAPRQRNLLGRTSARKNLSMESIDFPLDDEDEIERLEDARKELQNQIIEEVKANEKLQSHMENRKKVLQERRLALEQDVARLQEQLHKEKNSRAIRETKADLEELALVEVDLANLEQKVSELGVRLNVQLQRNDGSTSDFCDSPQQISNHERKVKNMPDTEVIDASQSDRSISKDTYGGTENVSERRPESTPLPDKHLPTGSKKSGSKGEGANSTTSAMTKLTSRLNFLKVRRGQAANEHHNPDKSMESSHSARSQDKGKGSEHDQSLPSPNRHGGFETAPSQEKCRGLDSSQSLQISDFGSGKGKSLQKSDKLRKSDSQPRHHLDAWNPNPKHLERGLSEGHHQYYNVDKGR* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1230 861 Coils Coil 210 230 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 742 861 - -
Dod09g1230 861 Gene3D Rho GTPase activation protein 151 374 IPR008936 GO:0007165
Dod09g1230 861 SUPERFAMILY PH domain-like 30 144 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 742 772 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 641 729 - -
Dod09g1230 861 Coils Coil 541 600 - -
Dod09g1230 861 SMART RhoGAP_3 180 370 IPR000198 GO:0007165
Dod09g1230 861 MobiDBLite consensus disorder prediction 669 695 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 374 529 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 1 36 - -
Dod09g1230 861 PANTHER RHO GTPASE-ACTIVATING PROTEIN 7 4 757 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 488 527 - -
Dod09g1230 861 Gene3D - 27 145 IPR011993 -
Dod09g1230 861 CDD PH 40 139 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 814 861 - -
Dod09g1230 861 Pfam PH domain 39 143 IPR001849 -
Dod09g1230 861 ProSiteProfiles PH domain profile. 37 144 IPR001849 -
Dod09g1230 861 ProSiteProfiles Rho GTPase-activating proteins domain profile. 174 373 IPR000198 GO:0007165
Dod09g1230 861 Coils Coil 613 633 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 714 729 - -
Dod09g1230 861 PANTHER RHO GTPASE-ACTIVATING PROTEIN REN1 4 757 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 1 19 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 388 426 - -
Dod09g1230 861 CDD RhoGAP 183 321 - -
Dod09g1230 861 MobiDBLite consensus disorder prediction 793 813 - -
Dod09g1230 861 Pfam RhoGAP domain 183 326 IPR000198 GO:0007165
Dod09g1230 861 SUPERFAMILY GTPase activation domain, GAP 182 375 IPR008936 GO:0007165
Dod09g1230 861 MobiDBLite consensus disorder prediction 453 475 - -
Dod09g1230 861 SMART PH_update 38 146 IPR001849 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1230 Dod-Chr9 33355670 33370888 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1230 - - gmx:100817373 1118.61