Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1228 ATGGACGTTAAGTTCGTTGCCACGTTATCACTCTTATGTGCAATTTACGTCACAAGTTCCGTTGCACTTGACCCTTGTGCCTCTAAGCCCTATGACTCGGACCTCACCGTGTTCCCCATATACGGCAAATGCTCACCTTTCAACCCACCAAAAGCAGATTCGTGGGCCAACACGATCATAAACATGGCCTCCAAGGACCCGGCCCGAGTCAAGTACCTCTCCACCTTAGTGGGCCAAAAGGGCGTGATCTCGGCGCCAATCGCTTCGGGCCAGGCCTTCAACATCGGTAGCTACGTGGTCCGGGTCAAGATTGGAACCCCGGGCCAGCTCATGTTCATGGTCCTGGACACCAGCACGGACGAGGCCTTCGTCCCGTGCTCGGGCTGCCTGGGCTGCTCAGCCACCACGTTCTCCCCAAACGGCTCCACAAGTTACGGCCCACTGGACTGCTCAGTCCCGCAGTGCGCTCAGGTGCGTGGGCTTCAATGCCCGGCCACAGGCTCTGGCGCGTGCTCATTCAACCAATCCTACGCGGGTTCCTCTTTCTCCGCGACGCTCGTCCAAGACTCGCTCAGATTAAACACTGACGTAATCCCAAGTTACTCTTTCGGCTGCGTCAACGCAATCTCCGGAACGTCGATTCCAGCCCAAGGGCTTCTGGGCTTGGGCCGTGGGCCATTGTCGCTGCTCTCACAATCCGGCACGCTGTATTCGGGAGTTTTCTCCTACTGCCTTCCGAGTTTCAAGTCTTACTACTTCTCCGGGTCGCTGAAACTTGGGCCCGTGGGCCAGCCCAAGAGCATTCGGACCACGCCGCTACTCCGGAACCCGCACCGGCCTTCTCTTTACTACGTGAACCTGACGGGGATCAGCGTGGGGAAAGTCCTTGTCCCTTTTCCCGTCGAGTATCTGGCGTTTGACCCGAATACCGGATCCGGAACCGTAATTGATTCGGGTACGGTTATAACCCGGCTGGTGGAGCCCGTTTACAATGCGGTGAGGGATGAGTTCAGGAAGCACGTGACGGGTCCGTTCTCGAGCCTGGGAGCATTCGACACGTGTTTCGTGAAGACGTACGAGACGCTGGCGCCGAGGGTTGCGCTGCATTTCACTGGGTTGGACCTGGTGCTGCCGTTGGAGAACAGCTTGATACACAGCAGCGCGGGGTCGCTGGCTTGTCTCGCAATGGCGGCGGCGCCCAATAATGTGAACTCGGTGTTGAACGTGATTGCCAACTTGCAGCAACAGAACCTTAGGATTTTGTTTGATACCGTTAATAACAAGGTTGGCATAGCCCGTGAGCTTTGTAACTAG 1314 0.5685 MDVKFVATLSLLCAIYVTSSVALDPCASKPYDSDLTVFPIYGKCSPFNPPKADSWANTIINMASKDPARVKYLSTLVGQKGVISAPIASGQAFNIGSYVVRVKIGTPGQLMFMVLDTSTDEAFVPCSGCLGCSATTFSPNGSTSYGPLDCSVPQCAQVRGLQCPATGSGACSFNQSYAGSSFSATLVQDSLRLNTDVIPSYSFGCVNAISGTSIPAQGLLGLGRGPLSLLSQSGTLYSGVFSYCLPSFKSYYFSGSLKLGPVGQPKSIRTTPLLRNPHRPSLYYVNLTGISVGKVLVPFPVEYLAFDPNTGSGTVIDSGTVITRLVEPVYNAVRDEFRKHVTGPFSSLGAFDTCFVKTYETLAPRVALHFTGLDLVLPLENSLIHSSAGSLACLAMAAAPNNVNSVLNVIANLQQQNLRILFDTVNNKVGIARELCN* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1228 437 Gene3D Acid Proteases 78 260 IPR021109 -
Dod09g1228 437 Pfam Xylanase inhibitor C-terminal 283 432 IPR032799 -
Dod09g1228 437 Gene3D Acid Proteases 261 437 IPR021109 -
Dod09g1228 437 ProSiteProfiles Peptidase family A1 domain profile. 98 432 IPR033121 -
Dod09g1228 437 PANTHER ASPARTYL PROTEASE-RELATED 10 437 IPR001461 GO:0004190|GO:0006508
Dod09g1228 437 PANTHER ASPARTYL PROTEASE AED3 10 437 - -
Dod09g1228 437 Pfam Xylanase inhibitor N-terminal 98 260 IPR032861 -
Dod09g1228 437 SUPERFAMILY Acid proteases 91 436 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1228 Dod-Chr9 33334703 33336104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1228 89 437 Miscellaneous Gene Families AT1G77480 26.020 4.96e-16 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1228 - - gmx:100816307 710.679