Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1165 ATGGCGTCAATCCGACGAACGCTTTCGCCGGCGTATCACGATCGGCAGTACCCTAACGGCGGCGCTGCCGCCGTCTTCTCCGTCAACTCTCCATCTCACAAGTTCTCTTCCTCCAACGCGAAGTACTCCTCGCCGCTACCGGCGCTGGCGGCTCGGGCGGCGGCCCTCCGGCGGTTCCTCGCGGGCGTCTTTGTCCGGCGGTACGGCCGGAAAGGACAGTGGCGGAGGGCTGTGTACCGGTGCCTTCTCTGCTTCTTCGTCGGATTCTTGCTCGGAATGTTCCCGTTCGGCCACGTCGGCGTCGTCGACGACGTTCGCCCTAGCGATATCACCTTCGAGATCAAGCCACCCCACGCGAACGCGCAACTGCTCCGCGAGAATCGCATCCTGGAGAATCGCGTCGTCGGTGGCCGGGAAAGCGGTTTTGACGAAGACGGTTTCGTGATGGATCCGGGGAGCCTGAGCCCGGAGAAGCAGAATTTGGTGGCGGAGAGGTTCGATTTCGTGCCGCGGAAGCAGCTGATTGTGGTTACGCCGACGTACAACCGCGCGTTTCAGGCGTATTTCTTGAACCGGTTGGGGCAGGTGCTGCGGCTGGTGCCTCCGCCGGTGGTGTGGGTGGTGGTCGAGATGAACGCGGCGTCGATGGAGACGGCGGAGGTGCTGAGGAAGACGGGTGTGATGTATAGGCATTTGGTGTGCGCTAAGAACTCGACGGCATTGAAGGACAGAGGGGTTCATCAGAGGAACACTGCGTTGGAGCACATTGAGCGCCATAGGCTCGATGGGATTGTTTACTTTGCGGACGATGATAATGTGTATTCGCTCGAGTTGTTTGAGTCATTGAGAGACATAAGCCGCTTTGGCACTTGGCCTGTTGCTATGCTAGCACCCAACAAGAACAAGGCTATTTTGGAGGGTCCAGTATGCAATGCAAGCCAAGTGATTGGATGGCATACAAATGAGAAAAGCAGAAGACTTCGTAGGTTTCATGTTGATATGTCTGGATTTGCTTTTAACAGCACAATCCTGTGGGATCCAAAGCGATGGCGACGTCCTACTTCAAATCCTATTCGACAATTAGATACAGTAAAAGAGGGTTTCCAAGAGACCACCTTCATAGAACAATTAGTAGAGGATGAGAGTCAAATGGAAGGTGTTCCTCCGGGCTGTTCCAAAGTATTGAATTGGCATCTCCATTTGGATACTCATAATATAGTTTATCCAAAGGGTTGGCTGCTTCAGAAAAACCTGGATGCTGTCATCCCTGTCAAGTAG 1278 0.5454 MASIRRTLSPAYHDRQYPNGGAAAVFSVNSPSHKFSSSNAKYSSPLPALAARAAALRRFLAGVFVRRYGRKGQWRRAVYRCLLCFFVGFLLGMFPFGHVGVVDDVRPSDITFEIKPPHANAQLLRENRILENRVVGGRESGFDEDGFVMDPGSLSPEKQNLVAERFDFVPRKQLIVVTPTYNRAFQAYFLNRLGQVLRLVPPPVVWVVVEMNAASMETAEVLRKTGVMYRHLVCAKNSTALKDRGVHQRNTALEHIERHRLDGIVYFADDDNVYSLELFESLRDISRFGTWPVAMLAPNKNKAILEGPVCNASQVIGWHTNEKSRRLRRFHVDMSGFAFNSTILWDPKRWRRPTSNPIRQLDTVKEGFQETTFIEQLVEDESQMEGVPPGCSKVLNWHLHLDTHNIVYPKGWLLQKNLDAVIPVK* 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1165 425 Pfam Glycosyltransferase family 43 193 401 IPR005027 GO:0015018|GO:0016020
Dod09g1165 425 PANTHER GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE 49 422 IPR005027 GO:0015018|GO:0016020
Dod09g1165 425 CDD GlcAT-I 174 403 IPR005027 GO:0015018|GO:0016020
Dod09g1165 425 PANTHER GLYCOSYLTRANSFERASES 49 422 - -
Dod09g1165 425 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 173 419 IPR029044 -
Dod09g1165 425 SUPERFAMILY Nucleotide-diphospho-sugar transferases 173 418 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1165 Dod-Chr9 32470792 32475515 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dod09g1165 1 425 Glycosyltransferase AT1G27600 62.207 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1165 K20869 - gmx:100809892 628.246