Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1164 ATGTGTAATCCTAAGCCATCTTCAACATCCCCATTTCTGTGTCCCGCAAAAGCCCACCTTATAACTCCAAACCCCAAACTCATGGATCCTCCTCCTCATGATCAAGTCCAAGATGAACTTCACAGATGGCCAACTCCCAATGAGGTCTTAGCAGAAATCAAGGCCATAGGGAAGATATCAGGCCCAACAGCCATCACTGGCTTACTCATGTACTCAAGGGCCATGATCTCAATGCTCTTCCTTGGCTACCTTGGTGAGATGGAGCTAGCAGGAGGGTCTCTCTCCATTGGCTTTGCCAACATCACTGGCTACTCTGTGATCTCTGGATTAGCCATGGGAATGGAACCCATTTGCGGACAAGCATACGGAGCAAAACGATGTAAGATACTTGGCTTGACCCTTCAAAGAACCGTCCTCCTACTCCTCTCAACCTCCATCCCAATCTCACTCACATGGCTCAACATGAAGAGGATCCTCTTGTGGTGTGGCCAAGACCAAGACATATCATCAACTGCACAAACCTTCATTCTCTTCTCCATACCAGACCTCTTCTTCCTCTCACTCCTCCACCCTCTCAGAATCTACCTTAGGACTCAAAGCATCACAATGCCACTGACATACTGCTCAGCCATCTCAGTCCTCCTCCATGTCCCTCTCAATTTTCTCCTAGTTGTCCACCTCAAGATGGGTGTTGCAGGGGTAGCCATTGCAATGGTTTGGACCAACTTCAACCTCTTCCTCTTCCTCTCCTCCTTTGTCTACTTCTCTGGTGTATACAAAGACTCATGGGTTGCCCCAAGCATGGATTGCCTAAGAGGCTGGTCATCCTTGCTTGCACTTGCAATCCCAACATGTGTCTCAGTTTGCTTAGAGTGGTGGTGGTATGAACTCATGATAATACTTTGTGGACTTTTGGTCAATCCCAAAGCCACCATTGCCTCGATGGGAATCCTCATCCAAACAACAGCACTAGTATATGTTTTCCCATCATCCCTTAGCCTCGGTGTCTCCACAAGAGTTGGGAATGAGTTAGGTGCCAATAGACCCGCAAAAGCCCGCATCTGCATGATGGTTTCACTCTTCTGTGCAATGGCTTTAGGCATAGGAGCCATGGTTTTCACCACCTTGATGAGGCACCGATGGGGGAGGTTCTTCACAAGTGACAAAGAGATCCTGAGCCTCACTGCCATAGCTTTGCCTATTGTTGGCCTTTGTGAGCTTGGGAACTGTCCACAAACCACAGGTTGTGGGGTGCTTAGGGGAAGTGCAAGACCCACCACTGGGGCTAACATAAACTTGGGCTCATTCTACCTTGTGGGCATGCCAGTGGCCATCCTTCTTGGGTTTGTGGTTAAAATGGGGTTTGCTGGGCTTTGGCTCGGGTTGCTTGCGGCCCAAGCCACGTGTGCGAGCCTCATGCTGTTTGTTCTGTGCAGGACGGACTGGAATCTCCAAGTTGAAAGAGCAAAGGAGCTCACAAAGGCTTCAGCTTCCACCACCACCACTGCTTCTATTTCTACAACAACACCACTACCCACATTCACAAAAGAAGAGTGTTGCAAGATGAAGAATGATCATGCCTATCTTGAAGAGATTACTGTGATCACAGTCACAGATAATAATGATCAGCCTGCAAAGACAGAAGAAGAAGAATCACTTGAATCAGACCCACTGATCACACCCACTGCCACCAAACACACCTCAAATTAG 1710 0.4842 MCNPKPSSTSPFLCPAKAHLITPNPKLMDPPPHDQVQDELHRWPTPNEVLAEIKAIGKISGPTAITGLLMYSRAMISMLFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKRCKILGLTLQRTVLLLLSTSIPISLTWLNMKRILLWCGQDQDISSTAQTFILFSIPDLFFLSLLHPLRIYLRTQSITMPLTYCSAISVLLHVPLNFLLVVHLKMGVAGVAIAMVWTNFNLFLFLSSFVYFSGVYKDSWVAPSMDCLRGWSSLLALAIPTCVSVCLEWWWYELMIILCGLLVNPKATIASMGILIQTTALVYVFPSSLSLGVSTRVGNELGANRPAKARICMMVSLFCAMALGIGAMVFTTLMRHRWGRFFTSDKEILSLTAIALPIVGLCELGNCPQTTGCGVLRGSARPTTGANINLGSFYLVGMPVAILLGFVVKMGFAGLWLGLLAAQATCASLMLFVLCRTDWNLQVERAKELTKASASTTTTASISTTTPLPTFTKEECCKMKNDHAYLEEITVITVTDNNDQPAKTEEEESLESDPLITPTATKHTSN* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1164 569 PANTHER MULTIDRUG RESISTANCE PROTEIN 31 506 - -
Dod09g1164 569 MobiDBLite consensus disorder prediction 539 569 - -
Dod09g1164 569 TIGRFAM matE: MATE efflux family protein 65 459 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod09g1164 569 CDD MATE_eukaryotic 52 488 IPR045069 GO:0042910|GO:1990961
Dod09g1164 569 PANTHER PROTEIN DETOXIFICATION 31 506 - -
Dod09g1164 569 Pfam MatE 283 445 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Dod09g1164 569 Pfam MatE 62 222 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1164 Dod-Chr9 32435860 32438075 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1164 K03327 - gmx:100788339 852.432