Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1153 ATGACATCCTCTAAGAGACCAAATGCGGAGCCCAATGGGAAAGGGAAACGCCAAAAGTCTGCGGGTGGGTTTTCACCATTGGACTTGGCTCCTGGGAGCGTTGTTTTCCGTTTACTCTGTCCCGCGACTAGGATTGGCAGTGTTATTGGTAAAGGCGGTGCCATAGTATCGCAAATCCGACAGGAAACTGGTGTGAAGGTTAAGATTGAGGAAGCTATGCCTGGATGCGATGAGAGGGTTATTACTATTCTAGGTTCTGAGAAGGAGACTGAAGAAGAGACTGAGCAGGGAAGGGAGGTCAATAATGATGAAGCTGATGGAAAGGAGGAGGATAATGAGACGAAAGATCACAGTGACAATGGTGAAGAGAAAGATTCTGTTCCCGTCGAAGATTCGAAGGTTGAGAAGGGACATTCGTCTATTCGGAAGGCTCTATCACTAGTTTTTGAGAGGATGGTTGAAGGAGTGGAGGAGACAACGGACGGTGATAAAGAAAGCAGTAAATCTTCATCCGTTGTTTTTAGGCTACTTGTCCTTTCTAATCAAGTTGGATGCCTTCTGGGAAAGGGTGGTAGCGTGATAAAACAAATGTCAGCTGATAGTGGGGCACAGATTCGGATCCTTCCGAGGGATAAACTTCCATTGTGTGCGACGGCTTCTGATGAGCTAGTTCAGATCACTGGAGGAGTTGATGTTGTCAGGAAAGCTCTTCAATCTGTTTCTCAACAGCTTTTGGGAAATCTGCCTCGGGATCATGAATCTCTTTCTGCCAATTCTACAGTGCCATCATCTCATTCATTTGGACAATTCCCGCCACACAACCGTTCTTTAGCAGCTCAAGGAGTGCCTTTTGCTGCTGGTTCTCATGATGTTTCTGTTTTCCATCCTGCTCCTCCTCTGATTCCCAAACTTCATGAAGGTGCCATACATGGGCGCATGAGGCCTTCACAGGAAATGCTTACTTTCCGTTTATTGTGTCATACTGAAAGGGTAGGTAATATAATTGGTAAAGGTGGAGCAATCATAAAAACTGTGCAGCAAGAGACAGCTAGTGAAATCAAAGTTATAGAAGGCATTCCAGATTCGGAGGACTGCATTATTGCCATATTGGGTCCGGCGCACCCAGACGATCGAATATCTCCCGTTCAAGAGGCCGTATTTCGTGTGCAGGCCAGAATAGGCAGGGCTATACCTGATGCCAAAGAGCATAGTATGCTAGCCAGGCTTCTTGTTAATTCCAACCAAATAGGTTGTCTCCTTGGCAAGGGTGGTTCCATCATAACTGAAATGAGGAAGTTATCAGGGGCCCACATCCGTATATTAGGAAAGGACAAGGTTCCAAAGTGCGCTGCAGAAGATGAAGAAGTAATTCAGATAAGTGGAGAATTAGAGGCAGTGCACGATGCGCTTGTGCAAGTAACCACGAGACTACGACACCATTTCTTCCGCGATGCATTTCCATCTGTCAATTATCCTTCCAATTCTGCATTTTTAGATCAAGTTCCTCCATTCCCACCATACTTTGGAAGGCGGGGACTTTCACCTCCAGGAATGTATTCTAACCTTGGTCCTCCACCTCCACGTGGAGGTTTTCCCCTCGATGATCATCCTCCTTTTATGAATAGTATACTTAGACCAGGCATTCCTCCTCACATATCTGAAAGGAAGCCTTGGGGTCCTCAGGGGCTACTAGAAGGTGGTGGACCCATTGGATTGCCAGACTTTCCAGGAGGCCCTCCTAGAAGAATTCCTGGATTTGCAGGAGGGGGCCAACCAATTATCACTAGTACCACTGTTGAAGTAGTTGTTCCTCGAACGCTTGTGCCCGTAATTTATGGGGAAGATGGTGAATGCTTAAAACAAATACTTCAGATCTCGGATGCAAATATTACTATTACTGATCCAAAACCTGGAGCTGTGGAAACTAAAATTATAATATCTGGAACCCCAGAGCAAACTCATGCTGCCCAAAGTCTTATTCAGGCATTTGTCTTGAGCGAGACAGAGTCTAGTTGA 2016 0.4588 MTSSKRPNAEPNGKGKRQKSAGGFSPLDLAPGSVVFRLLCPATRIGSVIGKGGAIVSQIRQETGVKVKIEEAMPGCDERVITILGSEKETEEETEQGREVNNDEADGKEEDNETKDHSDNGEEKDSVPVEDSKVEKGHSSIRKALSLVFERMVEGVEETTDGDKESSKSSSVVFRLLVLSNQVGCLLGKGGSVIKQMSADSGAQIRILPRDKLPLCATASDELVQITGGVDVVRKALQSVSQQLLGNLPRDHESLSANSTVPSSHSFGQFPPHNRSLAAQGVPFAAGSHDVSVFHPAPPLIPKLHEGAIHGRMRPSQEMLTFRLLCHTERVGNIIGKGGAIIKTVQQETASEIKVIEGIPDSEDCIIAILGPAHPDDRISPVQEAVFRVQARIGRAIPDAKEHSMLARLLVNSNQIGCLLGKGGSIITEMRKLSGAHIRILGKDKVPKCAAEDEEVIQISGELEAVHDALVQVTTRLRHHFFRDAFPSVNYPSNSAFLDQVPPFPPYFGRRGLSPPGMYSNLGPPPPRGGFPLDDHPPFMNSILRPGIPPHISERKPWGPQGLLEGGGPIGLPDFPGGPPRRIPGFAGGGQPIITSTTVEVVVPRTLVPVIYGEDGECLKQILQISDANITITDPKPGAVETKIIISGTPEQTHAAQSLIQAFVLSETESS* 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1153 671 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 28 89 IPR036612 GO:0003723
Dod09g1153 671 CDD PCBP_like_KH 408 474 - -
Dod09g1153 671 PANTHER KH DOMAIN-CONTAINING PROTEIN HEN4-LIKE 2 532 - -
Dod09g1153 671 CDD PCBP_like_KH 173 241 - -
Dod09g1153 671 Pfam KH domain 321 372 IPR004088 GO:0003723
Dod09g1153 671 Pfam KH domain 598 661 IPR004088 GO:0003723
Dod09g1153 671 Pfam KH domain 36 91 IPR004088 GO:0003723
Dod09g1153 671 Pfam KH domain 408 473 IPR004088 GO:0003723
Dod09g1153 671 Pfam KH domain 174 240 IPR004088 GO:0003723
Dod09g1153 671 PANTHER KH DOMAIN CONTAINING RNA BINDING PROTEIN 2 532 - -
Dod09g1153 671 Gene3D K Homology domain, type 1 32 97 IPR036612 GO:0003723
Dod09g1153 671 Gene3D K Homology domain, type 1 317 396 IPR036612 GO:0003723
Dod09g1153 671 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 401 483 IPR036612 GO:0003723
Dod09g1153 671 Gene3D K Homology domain, type 1 168 245 IPR036612 GO:0003723
Dod09g1153 671 Gene3D K Homology domain, type 1 402 481 IPR036612 GO:0003723
Dod09g1153 671 CDD PCBP_like_KH 35 86 - -
Dod09g1153 671 Gene3D K Homology domain, type 1 595 667 IPR036612 GO:0003723
Dod09g1153 671 ProSiteProfiles Type-1 KH domain profile. 171 240 - -
Dod09g1153 671 ProSiteProfiles Type-1 KH domain profile. 596 660 - -
Dod09g1153 671 CDD KH-I 598 661 - -
Dod09g1153 671 MobiDBLite consensus disorder prediction 1 27 - -
Dod09g1153 671 MobiDBLite consensus disorder prediction 85 138 - -
Dod09g1153 671 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 596 666 IPR036612 GO:0003723
Dod09g1153 671 MobiDBLite consensus disorder prediction 253 272 - -
Dod09g1153 671 ProSiteProfiles Type-1 KH domain profile. 404 473 - -
Dod09g1153 671 SMART kh_6 32 102 IPR004087 GO:0003676
Dod09g1153 671 SMART kh_6 403 478 IPR004087 GO:0003676
Dod09g1153 671 SMART kh_6 170 245 IPR004087 GO:0003676
Dod09g1153 671 SMART kh_6 318 394 IPR004087 GO:0003676
Dod09g1153 671 SMART kh_6 595 665 IPR004087 GO:0003676
Dod09g1153 671 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 162 245 IPR036612 GO:0003723
Dod09g1153 671 ProSiteProfiles Type-1 KH domain profile. 33 101 - -
Dod09g1153 671 CDD PCBP_like_KH 321 390 - -
Dod09g1153 671 SUPERFAMILY Eukaryotic type KH-domain (KH-domain type I) 312 374 IPR036612 GO:0003723
Dod09g1153 671 ProSiteProfiles Type-1 KH domain profile. 319 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1153 Dod-Chr9 32322692 32327824 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1153 K21444 - gmx:100777433 1016.14