Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1136 ATGGTGGTTTCCGATACTCCAATCGGTGGCTCTACGCCGCCGCCGCCGCCGCCGCAACCGGAGCAAGCCGCCACCAAGTTTGGGATCACGAAGCCTATCTCTGTCGCCGGTCCCACGGACGCCGATATCAATCGTAACACCGAATTGGGGAAGTTCCTGCTTGATTCGGGGCTTTACGAGAGCAATGAAGAAGCTGCCACCAGACAAGAGGTTCTTCGGTGCCTCGATCAGATTGTGAAAAGCTGGGTGAAGCAATTGACTCGCCAACGAGGGTACACAGATCAGTCGGTTGAGGATGCCAATGCTGTCATTTTCACATTTGGTTCTTATCGACTCGGGGTACATGGACCTGGAGCTGACATAGACACTTTGTGTGTTGGTCCTTCTTATGTGAACCGAGAGGAAGACTTCTTTATCATTTTGCATAACATCTTGGCTGAAATGGAAGAAGTTACTGAACTTCAACCAGTTCCTGATGCTCATGTGCCCGTGATGAAATTCAAGTTCCGGGGAATATCTATAGATTTGCTTTATGCAAGTATATCTCTTTCGGTTGTCCCAGAAGACCTGGATATCTCAGATGGTTCTGTGCTGTATGACGTTGATGAACCAACTGTTCGAAGTCTTAATGGCTGCAGGGTGGCAGATCAAATTCTTAAACTTGTTCCGAATGTTGAGCACTTCCGAACTACACTGAGATGTTTAAAGTTCTGGGCTAAAAGGCGTGGTGTTTATTCAAACGTTACGGGATTCCTTGGTGGTGTAAATTGGGCTCTTTTAGTTGCTCGAATTTGCCAGCTTTACCCTAATGCAATCCCTAGTATGCTGGTTTCTCGATTCTTCAGGGTCTATACACAGTGGCGGTGGCCAAACCCTGTGATGCTATGCTCTATAGAAGAGAGTGAACTGGGTTTCCCTATATGGGATCCTCGTAGAAACCCCCGGGACAGATTTCACATTATGCCAATAATTACTCCTGCATACCCTTGCATGAATTCCAGCTACAATGTCTCGGCAAGCACTCTTCGTGTTATGATGGAACAGTTTCGCTATGGCAACACAATCTGTGATGAAATTGAGCTTAACAAAGCCCAATGGAGTGCACTTTTTCAGCCATATTTCTTTTTTGAGGCCTACAAAAACTATTTACAAGTGGACATACTTGCAGCAGATGCTGATGATTTACTGGCATGGAAGGGTTGGGTAGAATCTCGGTTGAGACAGCTTACCCTGAAGATAGAACGGGATACAAATGGGATGCTGCAGTGTCATCCTTATCCACATGAGTATGTAGACACATCCAAGCCTTGTGCACATTCTGCATTTTTCATGGGCTTGCAAAGAAAAGAGGGAGTAAAAGGTCAAGAGGGACAGCAATTTGATATACGTGGTACGGTTGATGAATTCAGGCAAGAAATAAATATGTATGTATACTGGAAGCTAGGGATGGAAATCTATGTTTCTCATGTTCGTCGAAAGCAGCTTCCTGCATTTTTATTTCCAGATGGTTACAAACGCAATCGAACGCAGAGGCATATGAACCATCCAGCTGAAAAAATGGGTGAGGATGCCACAAAGTGCTACTCTGGGTCTGCTGAGAGAAGCATCAAGAGGAAAAATGACCCTGAAATGGTGGATCTGAAGCCAGACAAACCAGAGAAGCGGGCCTCTATCAGCCCACAGAGGCTGGAGTGTGTTTCTCCTGAAAGTTATCCAGGCGGTGCTTCTCAAATGAGTGTTGATTGTATCGAAGGGGTTAGGCCAGATGGTCCAGCGACCAGGGATGAGGACAGAAAATGCGAAATTAAGTCAACTGATGGACTCCTAGGTGCAATGAGTACTGAAGGACCTGACATGCAGATTAGTGAAACAGGTGTTGTTAACTCCACAAATGATAGGCAGAAATCAAGTTCTCTAGAAGCTCAGAATGAGAATGGAGTCAATAAGGACAAAGCTCGGGATCTGGATCTAGATTGCTTAGAAAGTGCAGAAACTGCATCTTGCAAAAGCTTGTCAAACTATAAAGACAGTGCTGTTGATATGGATCAACAACTAGACACAGCTTGTAATTTCGCATCGAGGACTGAATGCTCAGATTATGGACCAAGTGCAACCACCCAGAACCTCAATTGCGAGCGAGATGTCGGACTTGGAAGTGTTGAGGATGAGTTTGGATTGAATCACGTGACATTTGGGAGGAGAATTGCTGAAGTTGTCCACACTGCTCCCTTATACTGTGGTTAG 2244 0.4554 MVVSDTPIGGSTPPPPPPQPEQAATKFGITKPISVAGPTDADINRNTELGKFLLDSGLYESNEEAATRQEVLRCLDQIVKSWVKQLTRQRGYTDQSVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPSYVNREEDFFIILHNILAEMEEVTELQPVPDAHVPVMKFKFRGISIDLLYASISLSVVPEDLDISDGSVLYDVDEPTVRSLNGCRVADQILKLVPNVEHFRTTLRCLKFWAKRRGVYSNVTGFLGGVNWALLVARICQLYPNAIPSMLVSRFFRVYTQWRWPNPVMLCSIEESELGFPIWDPRRNPRDRFHIMPIITPAYPCMNSSYNVSASTLRVMMEQFRYGNTICDEIELNKAQWSALFQPYFFFEAYKNYLQVDILAADADDLLAWKGWVESRLRQLTLKIERDTNGMLQCHPYPHEYVDTSKPCAHSAFFMGLQRKEGVKGQEGQQFDIRGTVDEFRQEINMYVYWKLGMEIYVSHVRRKQLPAFLFPDGYKRNRTQRHMNHPAEKMGEDATKCYSGSAERSIKRKNDPEMVDLKPDKPEKRASISPQRLECVSPESYPGGASQMSVDCIEGVRPDGPATRDEDRKCEIKSTDGLLGAMSTEGPDMQISETGVVNSTNDRQKSSSLEAQNENGVNKDKARDLDLDCLESAETASCKSLSNYKDSAVDMDQQLDTACNFASRTECSDYGPSATTQNLNCERDVGLGSVEDEFGLNHVTFGRRIAEVVHTAPLYCG* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1136 747 Pfam Nucleotidyltransferase domain 101 174 IPR002934 GO:0016779
Dod09g1136 747 MobiDBLite consensus disorder prediction 518 576 - -
Dod09g1136 747 CDD NT_PAP_TUTase 68 222 - -
Dod09g1136 747 Gene3D - 28 370 - -
Dod09g1136 747 Gene3D Poly(A) polymerase predicted RNA binding domain 375 490 - -
Dod09g1136 747 PANTHER POLY A POLYMERASE 22 662 - -
Dod09g1136 747 MobiDBLite consensus disorder prediction 1 24 - -
Dod09g1136 747 Pfam Poly(A) polymerase predicted RNA binding domain 375 433 IPR007010 GO:0003723|GO:0043631
Dod09g1136 747 Gene3D Beta Polymerase, domain 2 60 216 IPR043519 -
Dod09g1136 747 SUPERFAMILY Nucleotidyltransferase 26 221 IPR043519 -
Dod09g1136 747 MobiDBLite consensus disorder prediction 617 645 - -
Dod09g1136 747 PANTHER NUCLEAR POLY(A) POLYMERASE 4 22 662 - -
Dod09g1136 747 MobiDBLite consensus disorder prediction 532 558 - -
Dod09g1136 747 SUPERFAMILY PAP/OAS1 substrate-binding domain 223 372 - -
Dod09g1136 747 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 375 500 IPR011068 GO:0003723|GO:0016779|GO:0031123
Dod09g1136 747 MobiDBLite consensus disorder prediction 608 650 - -
Dod09g1136 747 Pfam Poly(A) polymerase central domain 28 371 IPR007012 GO:0004652|GO:0043631
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1136 Dod-Chr9 32099956 32105159 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1136 K14376 - gmx:100802620 1182.55