Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1130 ATGGCGGATCACCACAGAGACAGCTTCCTCCGCCACCGCCTTACCCCACAGATTCGAGACCCTTCCGACGACGATCCCCCTCCGCACCCTAATACTTCCTCGTCTGCTGATTTCAATTTCGATACCTGCATAGCATCTTTGCACACATATCTCGGTGAAGTTGAAGACACTCGCCACAGGATAGCTTTCTTGGATGGTGGTTCTGTATTGAACCTTCCCCTGTTTCGTCTCCAAGGAGTTGTACTCTTTCCCGGAGCTACTCTTCCCCTAAGAGTTGTTGACCCCCATTTGGTGGCGGCTGCTGAGAGAGCTTTGAGTCAAGTTGATGTTCCTTACACTATTGGCGTGATTAGGATTCACAGGGATAATGCAAATCGTAGGATGAAATCAGCTAGCATTGGGACAACTGCAGAGATTCGACAATATGGTCGTCTAGAGGATGGTTCATTGAATGTGGTTACCCGTGGACAACAACGATTTCGCCTAAGACGGTGTTGGACTGATGTGGAAGGAGTGCCTTATGGAGAGGTCGAAATTATTGAGGAAGATCTACCATTGCAAACTCCAAGAGATGTGTTTGGGAAATCAGAACCATCATCGACCTGCAGCAGTGATGATAAATTCATGGAGAAGCCGGATCAGGAAATTAGATCAAATCTAAATGAAGCTAAAACACTGGATTCTAGAACTGGGGGCTGTTCGACTTGCGGAAAGCAGTCATACAAAGGAGAAGAGCTTAATAGATGTTGTAAAAATAGATATGCCTACCCATCAAACACAATTTCGAAGGCATTTTGGCCCCACTGGGTATATCGTATGTTCGACTCCTATTGGCTTGCACAAAGGGCTGCAGATATGTGGAAGCAGATAGTTGGGGTGCCTAGCATGGACAGTCTCATTAAGAAGCCTGATATTTTATCATTTTACATCGCTAGTAAAATACCCATCTCTGAATCTACTAGGCAGGAGCTCTTGGATATTGATGGCATTGCATACAGATTGCGCAGGGAAATTGAATTACTCGAGAGCCTTGATCTTATCAGATGTAAAAGCTGCCAGACGGTAATCGGACAACGAAGTGATATGTTGGTGATGTCAAGTGAGGGTCCTCTTGGTGCTTATGTGAATCCAGGTGGTTATGTGCATGAGGTAATGACTCTTTACAAGGCAAAGAACTTATATATCGTGGGGTCAGCAGTTAGAGAATACAGTTGGTTTCCTGGGTTTTCATGGACAGTGGCTCGATGTGCCTCATGTAACAGCCAAATGGGGTGGCTTTTTACAGCCACCAACAAAACACTGAGACCCTCGGCGTTTTGGGGGATAAGGAGCTGTGAAGTTGCAGAAGAAATACGCCGAAACCTTTGA 1368 0.4576 MADHHRDSFLRHRLTPQIRDPSDDDPPPHPNTSSSADFNFDTCIASLHTYLGEVEDTRHRIAFLDGGSVLNLPLFRLQGVVLFPGATLPLRVVDPHLVAAAERALSQVDVPYTIGVIRIHRDNANRRMKSASIGTTAEIRQYGRLEDGSLNVVTRGQQRFRLRRCWTDVEGVPYGEVEIIEEDLPLQTPRDVFGKSEPSSTCSSDDKFMEKPDQEIRSNLNEAKTLDSRTGGCSTCGKQSYKGEELNRCCKNRYAYPSNTISKAFWPHWVYRMFDSYWLAQRAADMWKQIVGVPSMDSLIKKPDILSFYIASKIPISESTRQELLDIDGIAYRLRREIELLESLDLIRCKSCQTVIGQRSDMLVMSSEGPLGAYVNPGGYVHEVMTLYKAKNLYIVGSAVREYSWFPGFSWTVARCASCNSQMGWLFTATNKTLRPSAFWGIRSCEVAEEIRRNL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1130 455 MobiDBLite consensus disorder prediction 1 35 - -
Dod09g1130 455 Gene3D - 275 339 - -
Dod09g1130 455 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 347 436 IPR004910 -
Dod09g1130 455 ProSiteProfiles Lon N-terminal domain profile. 72 343 IPR003111 -
Dod09g1130 455 Gene3D Peptide methionine sulfoxide reductase. 340 454 - -
Dod09g1130 455 SMART lon_5 71 343 IPR003111 -
Dod09g1130 455 Pfam ATP-dependent protease La (LON) substrate-binding domain 71 342 IPR003111 -
Dod09g1130 455 Gene3D - 52 180 IPR046336 -
Dod09g1130 455 PANTHER CEREBLON 22 447 - -
Dod09g1130 455 PANTHER PROTEIN CEREBLON 22 447 - -
Dod09g1130 455 SUPERFAMILY PUA domain-like 71 342 IPR015947 -
Dod09g1130 455 MobiDBLite consensus disorder prediction 1 26 - -
Dod09g1130 455 CDD CRBN_C_like 347 443 IPR034750 -
Dod09g1130 455 ProSiteProfiles CULT domain profile. 344 451 IPR034750 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1130 Dod-Chr9 32015709 32020330 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1130 K11793 - fve:101297109 525.398