Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1129 ATGATCTGCTTCAATAGGCTTAGGCACAAATCCAATGTTCTGGCACCACCTACTACGAGATTGTTGCCAGTGTTAGGTGGAAGTTGCGGAGGAGCAAAGGCAGTGACAAAGTTGTTGTTGGCAGTGATGTCGAGCACATTGAAGGAGAACGGTGGAGCCACTACTGAGGATTATACGAATGGTGGAGGTGTGAGGGACTTGTACGGTGAGGATCGTGCCACGGAGGACCAGCTTATCACCCCATGGAGCTTCTCAGTCTCAAGTGGCTGCACTTTGCTGCGTGATCCACGCTACAACAAAGGGCTTGCCTTCACTGAGAAAGAAAGAGATGCTCATTACTTGCGTGGCCTTTTGCCCCCAGCTGTCTTCACTCAGGATCTTCAGGAAAAGAGGTTGATGCACAATCTTCGCCAGTATGAGGTTCCTCTGCATAGGTACATGGCCATGATGGATCTTCAGGAGAGGAATGAGAGGTTGTTTTACAAGCTTCTGATAGACAATGTTGAGGAACTACTTCCTGTTGTTTACACTCCAACCGTTGGAGAAGCCTGCCAGAAATATGGAAGCATTTTTAGGCGTCCTCAGGGTCTATATATCAGTTTGAAGGAGAAAGGCAAGATCCTGGAAGTGCTGAAAAACTGGCCAGAGAAGACCATCCAAGTTATTGTTGTGACTGATGGTGAACGTATATTGGGACTTGGAGATCTTGGTTGCCAGGGAATGGGGATTCCTGTTGGGAAACTTTCTCTTTACACTGCATTGGGAGGTGTTCGCCCATCATCTTGCTTGCCTATAACCATTGATGTTGGCACAAACAATGAGAAGTTGCTGAATGATGAGTTTTACATTGGGCTTAGACAAAAGAGGGCAACTGGGAAGGAATATGCAGAGCTTCTAGATGAGTTTATGCGTGCAGCTAAGCAGAACTATGGGGAGAAAGTTCTTATCCAGTTTGAAGATTTCGCAAATCACAATGCATTTGATCTGCTGGCAAAATACAGCTCATCTCATCTTGTTTTCAATGATGATATACAGGGCACAGCATCTGTGGTATTAGCAGGACTGCTTGCTTCCCTCAAATTAGTTGGGGGAACCTTAGCTGATCATACCTTCTTATTCTTGGGTGCTGGAGAGGCTGGAACTGGTATAGCTGAGCTGATAGCTCTTGAGATTTCAAAGCAGACAAAAGCTCCAATAGAAGAGACCCGCAAGAAGATTTGGCTGGTTGACTCAAAGGGACTTATTGTTAGCTCTCGTCTGGGATCACTTCAGCACTTCAAGAAGCCTTGGGCCCATCAGCATGAACCTGTAAAGGAGCTTCTAGATGCCGTCAAGGCAATCAAGCCAACTGTGTTGATTGGATCATCTGGAGTAGGGAAGACATTTACCAAGGGGGTGGTTGAAACCATGGCATCGTTGAATGAGAAACCGCTCATTCTTGCTCTCTCCAACCCAACTTCACAATCTGAGTGCACTGCTGAAGAAGCTTACACATGGAGCAAGGGTCGAGCAATCTTCGCTAGTGGAAGTCCATTTGATCCTGTTGAGTACGAAGGAAAAGTTTTTGTTCCTGGACAGGCCAACAATGCTTACATATTCCCTGGGTTTGGTTTGGGTTTGATCATCTCTGGCGCAATCCGCGTGCGTGATGAGATGCTCTTAGCAGCCTCTGAAGCGTTGGCTGCACAAGTATCACAGGAGAACTATGACAAGGGACTGATTTACCCTCCATTCTCTAATATCAGGAAGATATCAGCTCACATTGCTGCTAACGTGGCAGCTAAGGCATATGAACTTGGTCTGGCTTCTCATCTACCTCGACCTAAGGATCTTGTCAAATACGCAGAAAGTTGCATGTACAGCCCGGGCTACAGAAGCTACCGTTGA 1887 0.4658 MICFNRLRHKSNVLAPPTTRLLPVLGGSCGGAKAVTKLLLAVMSSTLKENGGATTEDYTNGGGVRDLYGEDRATEDQLITPWSFSVSSGCTLLRDPRYNKGLAFTEKERDAHYLRGLLPPAVFTQDLQEKRLMHNLRQYEVPLHRYMAMMDLQERNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFRRPQGLYISLKEKGKILEVLKNWPEKTIQVIVVTDGERILGLGDLGCQGMGIPVGKLSLYTALGGVRPSSCLPITIDVGTNNEKLLNDEFYIGLRQKRATGKEYAELLDEFMRAAKQNYGEKVLIQFEDFANHNAFDLLAKYSSSHLVFNDDIQGTASVVLAGLLASLKLVGGTLADHTFLFLGAGEAGTGIAELIALEISKQTKAPIEETRKKIWLVDSKGLIVSSRLGSLQHFKKPWAHQHEPVKELLDAVKAIKPTVLIGSSGVGKTFTKGVVETMASLNEKPLILALSNPTSQSECTAEEAYTWSKGRAIFASGSPFDPVEYEGKVFVPGQANNAYIFPGFGLGLIISGAIRVRDEMLLAASEALAAQVSQENYDKGLIYPPFSNIRKISAHIAANVAAKAYELGLASHLPRPKDLVKYAESCMYSPGYRSYR* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1129 628 SMART Malic_M_2 344 597 IPR012302 GO:0051287
Dod09g1129 628 Gene3D - 342 628 - -
Dod09g1129 628 ProSitePatterns Malic enzymes signature. 340 356 IPR015884 GO:0004471
Dod09g1129 628 SMART malic_2 153 334 IPR012301 GO:0004471
Dod09g1129 628 Pfam Malic enzyme, NAD binding domain 344 596 IPR012302 GO:0051287
Dod09g1129 628 SUPERFAMILY Aminoacid dehydrogenase-like, N-terminal domain 67 343 IPR046346 -
Dod09g1129 628 PIRSF ME 52 628 IPR001891 GO:0004470|GO:0004471
Dod09g1129 628 PANTHER MALIC ENZYME 13 628 - -
Dod09g1129 628 PANTHER MALIC ENZYME-RELATED 13 628 - -
Dod09g1129 628 Pfam Malic enzyme, N-terminal domain 153 333 IPR012301 GO:0004471
Dod09g1129 628 CDD NAD_bind_1_malic_enz 344 622 - -
Dod09g1129 628 Gene3D - 87 341 IPR037062 GO:0004471
Dod09g1129 628 PRINTS Malic enzyme signature 219 248 IPR001891 GO:0004470|GO:0004471
Dod09g1129 628 PRINTS Malic enzyme signature 315 333 IPR001891 GO:0004470|GO:0004471
Dod09g1129 628 PRINTS Malic enzyme signature 255 277 IPR001891 GO:0004470|GO:0004471
Dod09g1129 628 PRINTS Malic enzyme signature 474 490 IPR001891 GO:0004470|GO:0004471
Dod09g1129 628 PRINTS Malic enzyme signature 159 183 IPR001891 GO:0004470|GO:0004471
Dod09g1129 628 PRINTS Malic enzyme signature 340 356 IPR001891 GO:0004470|GO:0004471
Dod09g1129 628 PRINTS Malic enzyme signature 371 387 IPR001891 GO:0004470|GO:0004471
Dod09g1129 628 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 344 627 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1129 Dod-Chr9 32009683 32015017 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1129 K00029 - gmx:100801564 1090.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1129 09 32009683 32015017 Dod09g1129 09 32009683 32015017 ECH