Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1107 ATGATAGCTTTGCCTCAAGTCCCCAGAACTTTGACAAATACTGCGGTTAAATTGCTTGAAGCTTTTGTGGACTCATTCTTTGAATTCATTGACCAGCCATTGCTTCCATCTCAGAGTAACTTTGGTCCGGTGGAGGAGTTGGGGGAAGCCATGCGTATGACCAGCATCCAAGGTCAAATTCCGGGTGATTTTCCAGAGGGTGTCTACATCAGAAACGGACCAAATCCACTTTTTGGTGGACTCAAGTCAACAAATTCTATCTTTGGGAAGTCAAGTCACATTTGGGTGGAAGGAGAGGGAATGCTCCATGCATTGTATTTTGAAAAATCAAGTCATGGAAGCTGGACAATCCTGTACAAAAACAGACACGTTGAGACTGAAACGTACAAGCTTGAAAAACAAAGCAAGAAACCATTGTTTCTACCGGCCATAGAAGGCGATTCATCAGCCATTTTGTCTGCTTATCTGCTGAATTGGTTGAGATTTGGCAAAGCAAACAAATACATTAGCAACACCAATGTGTTTGAGCATTCAGGGAAGTTTTATTCGGTTGCTGAAAGTCACATCCCACAGGAGATTGATATCTTTACCTTGAAAACGATAAAGAACTGGGATGTTAATGGAGCCTGGAATCGACCTTTTACCAGCCACCCAAAGAAAGCTCCAGATACAGGGGAACTGGTTACATTAGGAGTGGCTCCAACCAAGCCTTTTGTTGTGGTTGGAATTATTTCTGCTGATGGAAATAAATTGGTTCATATTGTTGATCTCAAACTAAGCAGATGCAGCCTTTGCCATGACATAGGTGTTACACGGAGGTACAATGTGATCATGGATTTCCCACTAACCATTGCTCTAAACAGACTTCTTAGTGGAGGCCCATTAATAAAGTACAATAAGGAGGAATACGCAAGGATTGGAGTAATGCCACGTTGTGGTGATGCAAACTCAATCAAGTGGTTTGAGGTGGAGCCTAATTGCACTTTTCACATTATCAACTCTTTTGAGGATGGTCACGAGGTTGTAGTGAGGGGTTGCAGATCCCTTGATTCGCTAATTCCTGGACCTGACCCGAGTTCTAATGAATTTGGTTCGCTATCTCGTTGTTATGAATGGCGATTGAATATGCAAACTGGTGAAGTTAAAGAAAAAGATCTCTGTGGAGCCAAAGTGGTTTATATGGATTTTCCTCTGGTCAATGCAAACTTCATAGGTATTAAGAATAAATATGCATACACACAAGTAGTTGATCACATTGCAAGCTCTACTCAAGACGTGCCAAAATATAGAGGTCTAGCGAAGCTCTACTTCGAAGAATCAAATGCAGAGTTGTCCATGAGAGACAAAGAGCAACCTGAAGAGCCAATAAGGGTGGAATACCATATGTTTGAGAAGAATACATTTTGCAGTGGAGCTGCCTTTGTCCCCAGAGATGGTGGTCTAGAAGAAGATGACGGTTGGATAGTCACTTTTGTTCACAATGAAGATACTGGCACATCTCAAGTTCATATAATTGACACAAAGAAGTTTTGTGATGAGACGGTTGCCAAAATTACTATGCCTCGAAGAGTTCCATACGGGTTTCATGGAGCTTTCATGCCAATCTCATTTCAGGCTCTGTAG 1623 0.419 MIALPQVPRTLTNTAVKLLEAFVDSFFEFIDQPLLPSQSNFGPVEELGEAMRMTSIQGQIPGDFPEGVYIRNGPNPLFGGLKSTNSIFGKSSHIWVEGEGMLHALYFEKSSHGSWTILYKNRHVETETYKLEKQSKKPLFLPAIEGDSSAILSAYLLNWLRFGKANKYISNTNVFEHSGKFYSVAESHIPQEIDIFTLKTIKNWDVNGAWNRPFTSHPKKAPDTGELVTLGVAPTKPFVVVGIISADGNKLVHIVDLKLSRCSLCHDIGVTRRYNVIMDFPLTIALNRLLSGGPLIKYNKEEYARIGVMPRCGDANSIKWFEVEPNCTFHIINSFEDGHEVVVRGCRSLDSLIPGPDPSSNEFGSLSRCYEWRLNMQTGEVKEKDLCGAKVVYMDFPLVNANFIGIKNKYAYTQVVDHIASSTQDVPKYRGLAKLYFEESNAELSMRDKEQPEEPIRVEYHMFEKNTFCSGAAFVPRDGGLEEDDGWIVTFVHNEDTGTSQVHIIDTKKFCDETVAKITMPRRVPYGFHGAFMPISFQAL* 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1107 540 PANTHER BETA-CAROTENE DIOXYGENASE 5 535 IPR004294 GO:0016702
Dod09g1107 540 Pfam Retinal pigment epithelial membrane protein 47 534 IPR004294 GO:0016702
Dod09g1107 540 PANTHER OS06G0162550 PROTEIN 5 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1107 Dod-Chr9 31723341 31727162 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1107 - - gmx:100817738 941.028
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dod09g1107 09 31723341 31727162 Dod09g1107 09 31723341 31727162 ECH