Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dod09g1106 ATGGCAACTTTACACATTGCTCTTGCACCCAATTGCTCCATTCAGAAACGACCCTTTACCGTCCCTCATGGGTTCAATCACTCCATGGCTGCAGGAGTACTCTCCTCCCTATTCAAGCCAATATTAAGATCGTTGCCTCAAATTCCTCTGCAAATTGATACTTCCGAAACCATGATGAAAAGCATCACGACTAAATTCCTCGATGCTGTTGTGGATTCAGTTTTTGAGTATGTTGACCAGCCACGGCTTCCGTCTCAGAGCAACTTTGCTCCAGTTGAGGAGATAGGGAAGGCCATGCCTATCACCAATATCCAAGGCCAAATACCACAGGGCTTTCCAGAGGGTGTCTACATTAGAAATGGATCAAACCCACTATTTGGAGGACTGAAATCAACCAAGTGTGTGTTGGGTTGGTCATATAGCGCATGGGTGGAAGGAGAAGGAATGCTTCATGCTTTGTATTTCAAAAAGCAAAGTGGCACTGATGGGAGTTGCAACATCTTGTACAACAACAGACACGTTGAAACTGACACATACAAGCTTGAGAAACAAAGCAACAAGCCTTTGTTTCTCCCTTCAGTGAAAGGAGATTCACTGGCCGTTTTGTCTTCTCTTATGCTTAACAAGTTGAGATTCGGAAAAAACTATAAATATTATAGCAACACCAATGTGTTCGAGCATTCAGGAAAGTTCTACTCGGTTGCTGAAAGTCACATCGCGCAAGAGATTGACATCTTTACATTGAGTGTTTTACAAGACTGGGATATCAATGGAGCCTGGAATCGTCCTCTTGGCAGCCACCCCAAGAAAGTTCCAGGTACAGGAGAGCTGGCTATCTTTGGGGTAGATGCAACTAAGCCTTTTCTTGAAGTTGGAATAGTTTCTGCTGATGGAAAGGAGTTGGTTCATAAAGTAGACATAGAACTAGAGAGGTGCTGTCTTTGTCATGAGATAGGTGTCACTCGCAGCTACATTGCTATATTGGATTTTCCACTGATCATAGATTTAAACAGACTACTTAGAAGAGGCCCATTAATCAAATATGAGAAGGAGAAATTTGCCAGGATTGGGATAATGCCATTCTATGGTGATGCAGACTCAATCAAATGGTTTGAGGTGGAACCTAATTGCACATTTCATGTCATCAATTCTTTTGAAGATGGTCATCAGGTCGTGTTGTGGGGTTGCAGAGCACTAGATTCAATAATTCCAGGACCTGTACAAGGTCTGAATAATGACTCAAAGTGGTTCTCTCGTTGTTATGAATGGAGATTGAACATGAAAACTGGGCAAGTTAAGGAGAAATACCTCACTGGTCCAGGTCTGTTTATGGATTTTCCTGTAATCAATGAAAGTTTTAGAGGAATTAATAATAGATACGCATACACCCAAGTCGTTGATCCCGCTGCTAGCTGTGATGCAGACTTGCCAAAATACGGGGCTCTAGCCAAGTTATACTTTGGAGACCAATTTTCAGAGGGAGACACAGAACAAGAAGAGCCTATAAGGGTGGAGTACCATAAATTTGAGAGGAATGTTTTTTGCACGGGATCTGCCTTTGTCCCTAAAGAAGGTGGGCTTGAAGAGGATGATGGTTGGATCATCACTTTTGTTCACAATGAAGACACTGACATATCACAAGTTCTTATAATTGACACAAAGAAGTTCTCTGGCGAGGCAGTTGCCAAAATTACCATGCCTTGCAGAGTTCCTTATGGATTTCACGGTGCTTTCATGCCAATCTCATTTTAG 1752 0.4241 MATLHIALAPNCSIQKRPFTVPHGFNHSMAAGVLSSLFKPILRSLPQIPLQIDTSETMMKSITTKFLDAVVDSVFEYVDQPRLPSQSNFAPVEEIGKAMPITNIQGQIPQGFPEGVYIRNGSNPLFGGLKSTKCVLGWSYSAWVEGEGMLHALYFKKQSGTDGSCNILYNNRHVETDTYKLEKQSNKPLFLPSVKGDSLAVLSSLMLNKLRFGKNYKYYSNTNVFEHSGKFYSVAESHIAQEIDIFTLSVLQDWDINGAWNRPLGSHPKKVPGTGELAIFGVDATKPFLEVGIVSADGKELVHKVDIELERCCLCHEIGVTRSYIAILDFPLIIDLNRLLRRGPLIKYEKEKFARIGIMPFYGDADSIKWFEVEPNCTFHVINSFEDGHQVVLWGCRALDSIIPGPVQGLNNDSKWFSRCYEWRLNMKTGQVKEKYLTGPGLFMDFPVINESFRGINNRYAYTQVVDPAASCDADLPKYGALAKLYFGDQFSEGDTEQEEPIRVEYHKFERNVFCTGSAFVPKEGGLEEDDGWIITFVHNEDTDISQVLIIDTKKFSGEAVAKITMPCRVPYGFHGAFMPISF* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dod09g1106 583 PANTHER OS06G0162550 PROTEIN 34 581 - -
Dod09g1106 583 PANTHER BETA-CAROTENE DIOXYGENASE 34 581 IPR004294 GO:0016702
Dod09g1106 583 Pfam Retinal pigment epithelial membrane protein 92 580 IPR004294 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dod09g1106 Dod-Chr9 31714851 31721024 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Dod09g1106 - - gmx:100817207 891.338